Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc60Q8C4J0 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Ccdc60Q8C4J0 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Ccdc60Q8C4J0 CT025610.1-201ENSMUST00000224552 1786 ntBASIC16.43■□□□□ 0.22
Ccdc60Q8C4J0 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc60Q8C4J0 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc60Q8C4J0 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc60Q8C4J0 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Ccdc60Q8C4J0 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc60Q8C4J0 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc60Q8C4J0 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC16.43■□□□□ 0.22
Ccdc60Q8C4J0 Gm44775-201ENSMUST00000207266 1456 ntBASIC16.43■□□□□ 0.22
Ccdc60Q8C4J0 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC16.43■□□□□ 0.22
Ccdc60Q8C4J0 Gm13813-201ENSMUST00000120998 787 ntBASIC16.43■□□□□ 0.22
Ccdc60Q8C4J0 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC16.43■□□□□ 0.22
Ccdc60Q8C4J0 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC16.43■□□□□ 0.22
Ccdc60Q8C4J0 Gm25927-201ENSMUST00000175058 117 ntBASIC16.43■□□□□ 0.22
Ccdc60Q8C4J0 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC16.43■□□□□ 0.22
Ccdc60Q8C4J0 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc60Q8C4J0 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC16.43■□□□□ 0.22
Ccdc60Q8C4J0 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc60Q8C4J0 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Ccdc60Q8C4J0 Gm3052-202ENSMUST00000188254 2224 ntBASIC16.43■□□□□ 0.22
Ccdc60Q8C4J0 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc60Q8C4J0 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc60Q8C4J0 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc60Q8C4J0 Gm28323-201ENSMUST00000186817 2499 ntBASIC16.43■□□□□ 0.22
Ccdc60Q8C4J0 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc60Q8C4J0 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC16.43■□□□□ 0.22
Ccdc60Q8C4J0 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc60Q8C4J0 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc60Q8C4J0 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Ccdc60Q8C4J0 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc60Q8C4J0 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc60Q8C4J0 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Ccdc60Q8C4J0 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc60Q8C4J0 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc60Q8C4J0 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc60Q8C4J0 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Ccdc60Q8C4J0 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC16.43■□□□□ 0.22
Ccdc60Q8C4J0 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC16.42■□□□□ 0.22
Ccdc60Q8C4J0 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc60Q8C4J0 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc60Q8C4J0 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc60Q8C4J0 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc60Q8C4J0 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC16.42■□□□□ 0.22
Ccdc60Q8C4J0 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc60Q8C4J0 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc60Q8C4J0 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC16.42■□□□□ 0.22
Ccdc60Q8C4J0 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc60Q8C4J0 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ccdc60Q8C4J0 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc60Q8C4J0 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc60Q8C4J0 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Ccdc60Q8C4J0 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc60Q8C4J0 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC16.42■□□□□ 0.22
Ccdc60Q8C4J0 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc60Q8C4J0 Snora78-201ENSMUST00000158630 128 ntBASIC16.42■□□□□ 0.22
Ccdc60Q8C4J0 Gm8099-201ENSMUST00000200510 742 ntBASIC16.42■□□□□ 0.22
Ccdc60Q8C4J0 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc60Q8C4J0 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc60Q8C4J0 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC16.42■□□□□ 0.22
Ccdc60Q8C4J0 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc60Q8C4J0 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc60Q8C4J0 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc60Q8C4J0 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc60Q8C4J0 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc60Q8C4J0 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Ccdc60Q8C4J0 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc60Q8C4J0 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc60Q8C4J0 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc60Q8C4J0 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc60Q8C4J0 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc60Q8C4J0 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc60Q8C4J0 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc60Q8C4J0 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC16.42■□□□□ 0.22
Ccdc60Q8C4J0 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Ccdc60Q8C4J0 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ccdc60Q8C4J0 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Ccdc60Q8C4J0 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ccdc60Q8C4J0 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc60Q8C4J0 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc60Q8C4J0 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Ccdc60Q8C4J0 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc60Q8C4J0 Gm12846-201ENSMUST00000120431 1373 ntBASIC16.41■□□□□ 0.22
Ccdc60Q8C4J0 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc60Q8C4J0 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc60Q8C4J0 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc60Q8C4J0 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc60Q8C4J0 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc60Q8C4J0 Gm11591-201ENSMUST00000120063 702 ntBASIC16.41■□□□□ 0.22
Ccdc60Q8C4J0 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC16.41■□□□□ 0.22
Ccdc60Q8C4J0 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc60Q8C4J0 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC16.41■□□□□ 0.22
Ccdc60Q8C4J0 Gm25261-201ENSMUST00000157416 134 ntBASIC16.41■□□□□ 0.22
Ccdc60Q8C4J0 Gm27514-201ENSMUST00000183692 110 ntBASIC16.41■□□□□ 0.22
Ccdc60Q8C4J0 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ccdc60Q8C4J0 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC16.41■□□□□ 0.22
Ccdc60Q8C4J0 Gm4935-201ENSMUST00000221316 1198 ntBASIC16.41■□□□□ 0.22
Ccdc60Q8C4J0 Zkscan3-207ENSMUST00000223831 2101 ntBASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms