Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf3Q8C120 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.45□□□□□ -0.26
Sh3rf3Q8C120 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sh3rf3Q8C120 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf3Q8C120 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf3Q8C120 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf3Q8C120 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf3Q8C120 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf3Q8C120 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf3Q8C120 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf3Q8C120 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf3Q8C120 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Sh3rf3Q8C120 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.44□□□□□ -0.26
Sh3rf3Q8C120 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf3Q8C120 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf3Q8C120 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf3Q8C120 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Sh3rf3Q8C120 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf3Q8C120 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf3Q8C120 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf3Q8C120 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf3Q8C120 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.44□□□□□ -0.26
Sh3rf3Q8C120 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.44□□□□□ -0.26
Sh3rf3Q8C120 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf3Q8C120 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf3Q8C120 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC13.44□□□□□ -0.26
Sh3rf3Q8C120 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC13.44□□□□□ -0.26
Sh3rf3Q8C120 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Sh3rf3Q8C120 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf3Q8C120 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf3Q8C120 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf3Q8C120 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf3Q8C120 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf3Q8C120 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf3Q8C120 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf3Q8C120 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf3Q8C120 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf3Q8C120 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
Sh3rf3Q8C120 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.44□□□□□ -0.26
Sh3rf3Q8C120 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf3Q8C120 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sh3rf3Q8C120 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.43□□□□□ -0.26
Sh3rf3Q8C120 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf3Q8C120 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf3Q8C120 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf3Q8C120 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.43□□□□□ -0.26
Sh3rf3Q8C120 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf3Q8C120 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf3Q8C120 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.43□□□□□ -0.26
Sh3rf3Q8C120 Gm11478-201ENSMUST00000117851 599 ntBASIC13.43□□□□□ -0.26
Sh3rf3Q8C120 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.43□□□□□ -0.26
Sh3rf3Q8C120 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf3Q8C120 Gm11814-201ENSMUST00000119515 929 ntBASIC13.43□□□□□ -0.26
Sh3rf3Q8C120 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Sh3rf3Q8C120 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC13.43□□□□□ -0.26
Sh3rf3Q8C120 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf3Q8C120 Gm22331-201ENSMUST00000158066 136 ntBASIC13.43□□□□□ -0.26
Sh3rf3Q8C120 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
Sh3rf3Q8C120 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf3Q8C120 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.43□□□□□ -0.26
Sh3rf3Q8C120 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf3Q8C120 Gm37922-201ENSMUST00000195596 455 ntBASIC13.43□□□□□ -0.26
Sh3rf3Q8C120 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf3Q8C120 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.43□□□□□ -0.26
Sh3rf3Q8C120 Gm17794-201ENSMUST00000220252 955 ntBASIC13.43□□□□□ -0.26
Sh3rf3Q8C120 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.43□□□□□ -0.26
Sh3rf3Q8C120 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf3Q8C120 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf3Q8C120 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf3Q8C120 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Sh3rf3Q8C120 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Sh3rf3Q8C120 Gm6091-201ENSMUST00000098307 165 ntBASIC13.43□□□□□ -0.26
Sh3rf3Q8C120 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf3Q8C120 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.43□□□□□ -0.26
Sh3rf3Q8C120 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf3Q8C120 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf3Q8C120 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf3Q8C120 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.43□□□□□ -0.26
Sh3rf3Q8C120 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf3Q8C120 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf3Q8C120 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh3rf3Q8C120 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf3Q8C120 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf3Q8C120 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf3Q8C120 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf3Q8C120 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Sh3rf3Q8C120 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf3Q8C120 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.42□□□□□ -0.26
Sh3rf3Q8C120 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf3Q8C120 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf3Q8C120 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.42□□□□□ -0.26
Sh3rf3Q8C120 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.42□□□□□ -0.26
Sh3rf3Q8C120 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf3Q8C120 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf3Q8C120 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf3Q8C120 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.42□□□□□ -0.26
Sh3rf3Q8C120 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf3Q8C120 Gm7561-201ENSMUST00000211203 886 ntBASIC13.42□□□□□ -0.26
Sh3rf3Q8C120 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sh3rf3Q8C120 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms