Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SprnQ8BWU1 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
SprnQ8BWU1 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
SprnQ8BWU1 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
SprnQ8BWU1 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.4□□□□□ -0.58
SprnQ8BWU1 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
SprnQ8BWU1 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SprnQ8BWU1 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.4□□□□□ -0.58
SprnQ8BWU1 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
SprnQ8BWU1 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
SprnQ8BWU1 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.4□□□□□ -0.59
SprnQ8BWU1 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.59
SprnQ8BWU1 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC11.4□□□□□ -0.59
SprnQ8BWU1 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.59
SprnQ8BWU1 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
SprnQ8BWU1 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.59
SprnQ8BWU1 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
SprnQ8BWU1 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
SprnQ8BWU1 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SprnQ8BWU1 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
SprnQ8BWU1 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SprnQ8BWU1 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.39□□□□□ -0.59
SprnQ8BWU1 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.39□□□□□ -0.59
SprnQ8BWU1 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SprnQ8BWU1 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SprnQ8BWU1 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SprnQ8BWU1 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
SprnQ8BWU1 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SprnQ8BWU1 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SprnQ8BWU1 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SprnQ8BWU1 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SprnQ8BWU1 Mir686-201ENSMUST00000102174 109 ntBASIC11.39□□□□□ -0.59
SprnQ8BWU1 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SprnQ8BWU1 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SprnQ8BWU1 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.39□□□□□ -0.59
SprnQ8BWU1 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
SprnQ8BWU1 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SprnQ8BWU1 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SprnQ8BWU1 Gm12490-201ENSMUST00000120255 560 ntBASIC11.39□□□□□ -0.59
SprnQ8BWU1 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
SprnQ8BWU1 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.39□□□□□ -0.59
SprnQ8BWU1 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.39□□□□□ -0.59
SprnQ8BWU1 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SprnQ8BWU1 Gm23984-201ENSMUST00000157139 203 ntBASIC11.39□□□□□ -0.59
SprnQ8BWU1 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SprnQ8BWU1 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC11.39□□□□□ -0.59
SprnQ8BWU1 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
SprnQ8BWU1 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.39□□□□□ -0.59
SprnQ8BWU1 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.39□□□□□ -0.59
SprnQ8BWU1 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
SprnQ8BWU1 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
SprnQ8BWU1 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
SprnQ8BWU1 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SprnQ8BWU1 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
SprnQ8BWU1 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SprnQ8BWU1 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.39□□□□□ -0.59
SprnQ8BWU1 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
SprnQ8BWU1 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.39□□□□□ -0.59
SprnQ8BWU1 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SprnQ8BWU1 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
SprnQ8BWU1 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SprnQ8BWU1 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SprnQ8BWU1 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
SprnQ8BWU1 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
SprnQ8BWU1 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.39□□□□□ -0.59
SprnQ8BWU1 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
SprnQ8BWU1 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SprnQ8BWU1 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SprnQ8BWU1 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SprnQ8BWU1 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.38□□□□□ -0.59
SprnQ8BWU1 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SprnQ8BWU1 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
SprnQ8BWU1 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
SprnQ8BWU1 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SprnQ8BWU1 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
SprnQ8BWU1 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SprnQ8BWU1 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SprnQ8BWU1 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SprnQ8BWU1 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SprnQ8BWU1 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SprnQ8BWU1 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SprnQ8BWU1 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.38□□□□□ -0.59
SprnQ8BWU1 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC11.38□□□□□ -0.59
SprnQ8BWU1 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SprnQ8BWU1 Gm22189-201ENSMUST00000103822 86 ntBASIC11.38□□□□□ -0.59
SprnQ8BWU1 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
SprnQ8BWU1 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SprnQ8BWU1 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC11.38□□□□□ -0.59
SprnQ8BWU1 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.38□□□□□ -0.59
SprnQ8BWU1 Gm13813-201ENSMUST00000120998 787 ntBASIC11.38□□□□□ -0.59
SprnQ8BWU1 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
SprnQ8BWU1 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SprnQ8BWU1 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.38□□□□□ -0.59
SprnQ8BWU1 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.38□□□□□ -0.59
SprnQ8BWU1 AC154846.1-201ENSMUST00000226278 862 ntBASIC11.38□□□□□ -0.59
SprnQ8BWU1 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
SprnQ8BWU1 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SprnQ8BWU1 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SprnQ8BWU1 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
SprnQ8BWU1 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms