Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC18■□□□□ 0.47
Usp54Q8BL06 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Usp54Q8BL06 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Usp54Q8BL06 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC18■□□□□ 0.47
Usp54Q8BL06 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.99■□□□□ 0.47
Usp54Q8BL06 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Usp54Q8BL06 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp54Q8BL06 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp54Q8BL06 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp54Q8BL06 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC17.99■□□□□ 0.47
Usp54Q8BL06 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp54Q8BL06 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp54Q8BL06 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Usp54Q8BL06 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Usp54Q8BL06 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Usp54Q8BL06 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp54Q8BL06 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp54Q8BL06 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Usp54Q8BL06 Cd63-ps-202ENSMUST00000154992 717 ntBASIC17.99■□□□□ 0.47
Usp54Q8BL06 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC17.99■□□□□ 0.47
Usp54Q8BL06 CT571245.2-201ENSMUST00000218421 305 ntBASIC17.99■□□□□ 0.47
Usp54Q8BL06 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp54Q8BL06 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp54Q8BL06 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Usp54Q8BL06 Gm7049-201ENSMUST00000223520 1712 ntBASIC17.99■□□□□ 0.47
Usp54Q8BL06 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp54Q8BL06 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Usp54Q8BL06 AC171277.1-201ENSMUST00000216902 1441 ntBASIC17.98■□□□□ 0.47
Usp54Q8BL06 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp54Q8BL06 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp54Q8BL06 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp54Q8BL06 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp54Q8BL06 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Usp54Q8BL06 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp54Q8BL06 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Usp54Q8BL06 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Usp54Q8BL06 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC17.98■□□□□ 0.47
Usp54Q8BL06 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp54Q8BL06 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC17.98■□□□□ 0.47
Usp54Q8BL06 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Usp54Q8BL06 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC17.98■□□□□ 0.47
Usp54Q8BL06 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
Usp54Q8BL06 Gm10731-201ENSMUST00000181171 448 ntBASIC17.98■□□□□ 0.47
Usp54Q8BL06 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Usp54Q8BL06 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC17.98■□□□□ 0.47
Usp54Q8BL06 Gm10371-202ENSMUST00000228010 1081 ntBASIC17.98■□□□□ 0.47
Usp54Q8BL06 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Usp54Q8BL06 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp54Q8BL06 Gm43721-201ENSMUST00000199677 2313 ntBASIC17.98■□□□□ 0.47
Usp54Q8BL06 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
Usp54Q8BL06 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp54Q8BL06 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.98■□□□□ 0.47
Usp54Q8BL06 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Usp54Q8BL06 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Usp54Q8BL06 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp54Q8BL06 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp54Q8BL06 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Usp54Q8BL06 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Usp54Q8BL06 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Usp54Q8BL06 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp54Q8BL06 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Usp54Q8BL06 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC17.97■□□□□ 0.47
Usp54Q8BL06 Mir7677-201ENSMUST00000184226 67 ntBASIC17.97■□□□□ 0.47
Usp54Q8BL06 Gm3332-201ENSMUST00000189337 928 ntBASIC17.97■□□□□ 0.47
Usp54Q8BL06 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC17.97■□□□□ 0.47
Usp54Q8BL06 Gm19287-201ENSMUST00000203190 358 ntBASIC17.97■□□□□ 0.47
Usp54Q8BL06 AC132901.1-201ENSMUST00000224345 508 ntBASIC17.97■□□□□ 0.47
Usp54Q8BL06 AC093022.5-201ENSMUST00000226841 1079 ntBASIC17.97■□□□□ 0.47
Usp54Q8BL06 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp54Q8BL06 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp54Q8BL06 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Usp54Q8BL06 Gm9072-201ENSMUST00000218390 1514 ntBASIC17.97■□□□□ 0.47
Usp54Q8BL06 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp54Q8BL06 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp54Q8BL06 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Usp54Q8BL06 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp54Q8BL06 Gm44291-201ENSMUST00000203102 2865 ntBASIC17.97■□□□□ 0.47
Usp54Q8BL06 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp54Q8BL06 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp54Q8BL06 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp54Q8BL06 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Usp54Q8BL06 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp54Q8BL06 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC17.97■□□□□ 0.47
Usp54Q8BL06 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Usp54Q8BL06 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp54Q8BL06 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Usp54Q8BL06 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC17.96■□□□□ 0.47
Usp54Q8BL06 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Usp54Q8BL06 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Usp54Q8BL06 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC17.96■□□□□ 0.47
Usp54Q8BL06 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC17.96■□□□□ 0.47
Usp54Q8BL06 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Usp54Q8BL06 Gm38355-201ENSMUST00000192514 1570 ntBASIC17.96■□□□□ 0.47
Usp54Q8BL06 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp54Q8BL06 Gm6210-201ENSMUST00000204734 1942 ntBASIC17.96■□□□□ 0.47
Usp54Q8BL06 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Usp54Q8BL06 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Usp54Q8BL06 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp54Q8BL06 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Usp54Q8BL06 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms