Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.21□□□□□ -0.62
Srrm4Q8BKA3 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Gm27731-201ENSMUST00000185192 107 ntBASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Gm45784-201ENSMUST00000188360 142 ntBASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
Srrm4Q8BKA3 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Srrm4Q8BKA3 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Srrm4Q8BKA3 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Srrm4Q8BKA3 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Srrm4Q8BKA3 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Srrm4Q8BKA3 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Srrm4Q8BKA3 Gm7553-201ENSMUST00000185805 1426 ntBASIC11.19□□□□□ -0.62
Srrm4Q8BKA3 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Srrm4Q8BKA3 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Srrm4Q8BKA3 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Srrm4Q8BKA3 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Srrm4Q8BKA3 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
Srrm4Q8BKA3 Gm12384-201ENSMUST00000119228 919 ntBASIC11.19□□□□□ -0.62
Srrm4Q8BKA3 Gm14660-201ENSMUST00000119809 575 ntBASIC11.19□□□□□ -0.62
Srrm4Q8BKA3 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Srrm4Q8BKA3 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Srrm4Q8BKA3 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Srrm4Q8BKA3 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.19□□□□□ -0.62
Srrm4Q8BKA3 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Srrm4Q8BKA3 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.19□□□□□ -0.62
Srrm4Q8BKA3 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC11.19□□□□□ -0.62
Srrm4Q8BKA3 Gm40466-201ENSMUST00000212174 422 ntBASIC11.19□□□□□ -0.62
Srrm4Q8BKA3 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.19□□□□□ -0.62
Srrm4Q8BKA3 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.19□□□□□ -0.62
Srrm4Q8BKA3 AC154276.1-201ENSMUST00000228874 1299 ntBASIC11.19□□□□□ -0.62
Srrm4Q8BKA3 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Srrm4Q8BKA3 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Srrm4Q8BKA3 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Srrm4Q8BKA3 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Srrm4Q8BKA3 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
Srrm4Q8BKA3 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Srrm4Q8BKA3 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Srrm4Q8BKA3 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.19□□□□□ -0.62
Srrm4Q8BKA3 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Srrm4Q8BKA3 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Srrm4Q8BKA3 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Srrm4Q8BKA3 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Srrm4Q8BKA3 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Srrm4Q8BKA3 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Srrm4Q8BKA3 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.18□□□□□ -0.62
Srrm4Q8BKA3 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Srrm4Q8BKA3 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Srrm4Q8BKA3 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Srrm4Q8BKA3 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Srrm4Q8BKA3 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms