Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gm6447-201ENSMUST00000118905 835 ntBASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 Gm15806-201ENSMUST00000120696 955 ntBASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 Mir1894-201ENSMUST00000122802 81 ntBASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Clrn3Q8BHH8 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn3Q8BHH8 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.16□□□□□ -0.46
Clrn3Q8BHH8 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.16□□□□□ -0.46
Clrn3Q8BHH8 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Clrn3Q8BHH8 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Clrn3Q8BHH8 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn3Q8BHH8 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn3Q8BHH8 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn3Q8BHH8 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn3Q8BHH8 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn3Q8BHH8 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn3Q8BHH8 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn3Q8BHH8 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Clrn3Q8BHH8 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.16□□□□□ -0.46
Clrn3Q8BHH8 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn3Q8BHH8 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Clrn3Q8BHH8 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Clrn3Q8BHH8 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Clrn3Q8BHH8 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.16□□□□□ -0.46
Clrn3Q8BHH8 Gm13612-201ENSMUST00000119276 390 ntBASIC12.16□□□□□ -0.46
Clrn3Q8BHH8 Gm12490-201ENSMUST00000120255 560 ntBASIC12.16□□□□□ -0.46
Clrn3Q8BHH8 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.16□□□□□ -0.46
Clrn3Q8BHH8 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn3Q8BHH8 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn3Q8BHH8 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.16□□□□□ -0.46
Clrn3Q8BHH8 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.16□□□□□ -0.46
Clrn3Q8BHH8 Gm38671-201ENSMUST00000200573 130 ntBASIC12.16□□□□□ -0.46
Clrn3Q8BHH8 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.16□□□□□ -0.46
Clrn3Q8BHH8 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.16□□□□□ -0.46
Clrn3Q8BHH8 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.16□□□□□ -0.46
Clrn3Q8BHH8 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn3Q8BHH8 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn3Q8BHH8 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn3Q8BHH8 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.16□□□□□ -0.46
Clrn3Q8BHH8 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn3Q8BHH8 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn3Q8BHH8 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn3Q8BHH8 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn3Q8BHH8 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn3Q8BHH8 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Clrn3Q8BHH8 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn3Q8BHH8 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.16□□□□□ -0.46
Clrn3Q8BHH8 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Clrn3Q8BHH8 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn3Q8BHH8 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn3Q8BHH8 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.15□□□□□ -0.46
Clrn3Q8BHH8 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.15□□□□□ -0.46
Clrn3Q8BHH8 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Clrn3Q8BHH8 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Clrn3Q8BHH8 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Clrn3Q8BHH8 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn3Q8BHH8 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn3Q8BHH8 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn3Q8BHH8 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn3Q8BHH8 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn3Q8BHH8 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn3Q8BHH8 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn3Q8BHH8 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn3Q8BHH8 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn3Q8BHH8 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.15□□□□□ -0.46
Clrn3Q8BHH8 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn3Q8BHH8 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn3Q8BHH8 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.15□□□□□ -0.46
Clrn3Q8BHH8 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn3Q8BHH8 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.15□□□□□ -0.46
Clrn3Q8BHH8 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn3Q8BHH8 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn3Q8BHH8 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.15□□□□□ -0.46
Clrn3Q8BHH8 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn3Q8BHH8 Gm5356-201ENSMUST00000093326 615 ntBASIC12.15□□□□□ -0.46
Clrn3Q8BHH8 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Clrn3Q8BHH8 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms