Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Gm12742-201ENSMUST00000117326 410 ntBASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Gm8062-201ENSMUST00000139696 444 ntBASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Gm19184-201ENSMUST00000196798 928 ntBASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Gm19309-201ENSMUST00000218295 205 ntBASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Atg4dQ8BGV9 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12□□□□□ -0.49
Atg4dQ8BGV9 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Atg4dQ8BGV9 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Atg4dQ8BGV9 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Atg4dQ8BGV9 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12□□□□□ -0.49
Atg4dQ8BGV9 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Atg4dQ8BGV9 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Atg4dQ8BGV9 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Atg4dQ8BGV9 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Atg4dQ8BGV9 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Atg4dQ8BGV9 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Atg4dQ8BGV9 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Atg4dQ8BGV9 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Atg4dQ8BGV9 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12□□□□□ -0.49
Atg4dQ8BGV9 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Atg4dQ8BGV9 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Atg4dQ8BGV9 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Atg4dQ8BGV9 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Atg4dQ8BGV9 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Atg4dQ8BGV9 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12□□□□□ -0.49
Atg4dQ8BGV9 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12□□□□□ -0.49
Atg4dQ8BGV9 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12□□□□□ -0.49
Atg4dQ8BGV9 Gm24548-201ENSMUST00000158650 108 ntBASIC12□□□□□ -0.49
Atg4dQ8BGV9 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Atg4dQ8BGV9 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Atg4dQ8BGV9 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12□□□□□ -0.49
Atg4dQ8BGV9 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12□□□□□ -0.49
Atg4dQ8BGV9 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12□□□□□ -0.49
Atg4dQ8BGV9 Gm5781-201ENSMUST00000219792 443 ntBASIC12□□□□□ -0.49
Atg4dQ8BGV9 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12□□□□□ -0.49
Atg4dQ8BGV9 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Atg4dQ8BGV9 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12□□□□□ -0.49
Atg4dQ8BGV9 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12□□□□□ -0.49
Atg4dQ8BGV9 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12□□□□□ -0.49
Atg4dQ8BGV9 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12□□□□□ -0.49
Atg4dQ8BGV9 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Atg4dQ8BGV9 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12□□□□□ -0.49
Atg4dQ8BGV9 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Atg4dQ8BGV9 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12□□□□□ -0.49
Atg4dQ8BGV9 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Atg4dQ8BGV9 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Atg4dQ8BGV9 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Atg4dQ8BGV9 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.99□□□□□ -0.49
Atg4dQ8BGV9 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Atg4dQ8BGV9 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Atg4dQ8BGV9 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Atg4dQ8BGV9 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Atg4dQ8BGV9 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Atg4dQ8BGV9 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Atg4dQ8BGV9 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Atg4dQ8BGV9 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Atg4dQ8BGV9 Gm13492-201ENSMUST00000119772 665 ntBASIC11.99□□□□□ -0.49
Atg4dQ8BGV9 Gm12502-201ENSMUST00000120197 444 ntBASIC11.99□□□□□ -0.49
Atg4dQ8BGV9 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.99□□□□□ -0.49
Atg4dQ8BGV9 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.99□□□□□ -0.49
Atg4dQ8BGV9 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.99□□□□□ -0.49
Atg4dQ8BGV9 Gm8738-201ENSMUST00000172606 329 ntBASIC11.99□□□□□ -0.49
Atg4dQ8BGV9 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms