Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ubp1Q811S7 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ubp1Q811S7 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ubp1Q811S7 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Ubp1Q811S7 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ubp1Q811S7 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ubp1Q811S7 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ubp1Q811S7 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ubp1Q811S7 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ubp1Q811S7 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ubp1Q811S7 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ubp1Q811S7 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ubp1Q811S7 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ubp1Q811S7 Gm16177-201ENSMUST00000120728 718 ntBASIC12.76□□□□□ -0.37
Ubp1Q811S7 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.76□□□□□ -0.37
Ubp1Q811S7 Gm4271-201ENSMUST00000174444 973 ntBASIC12.76□□□□□ -0.37
Ubp1Q811S7 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.76□□□□□ -0.37
Ubp1Q811S7 Gm40466-201ENSMUST00000212174 422 ntBASIC12.76□□□□□ -0.37
Ubp1Q811S7 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.76□□□□□ -0.37
Ubp1Q811S7 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ubp1Q811S7 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ubp1Q811S7 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ubp1Q811S7 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ubp1Q811S7 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ubp1Q811S7 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.76□□□□□ -0.37
Ubp1Q811S7 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ubp1Q811S7 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ubp1Q811S7 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Ubp1Q811S7 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ubp1Q811S7 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ubp1Q811S7 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.76□□□□□ -0.37
Ubp1Q811S7 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Ubp1Q811S7 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.76□□□□□ -0.37
Ubp1Q811S7 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ubp1Q811S7 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Ubp1Q811S7 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ubp1Q811S7 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ubp1Q811S7 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ubp1Q811S7 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Ubp1Q811S7 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ubp1Q811S7 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ubp1Q811S7 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ubp1Q811S7 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ubp1Q811S7 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ubp1Q811S7 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Ubp1Q811S7 Gm16479-201ENSMUST00000121706 932 ntBASIC12.75□□□□□ -0.37
Ubp1Q811S7 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ubp1Q811S7 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ubp1Q811S7 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ubp1Q811S7 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.75□□□□□ -0.37
Ubp1Q811S7 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ubp1Q811S7 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.75□□□□□ -0.37
Ubp1Q811S7 Gm45574-201ENSMUST00000210921 331 ntBASIC12.75□□□□□ -0.37
Ubp1Q811S7 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.75□□□□□ -0.37
Ubp1Q811S7 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ubp1Q811S7 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ubp1Q811S7 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ubp1Q811S7 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ubp1Q811S7 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ubp1Q811S7 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ubp1Q811S7 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ubp1Q811S7 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ubp1Q811S7 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ubp1Q811S7 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ubp1Q811S7 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ubp1Q811S7 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ubp1Q811S7 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ubp1Q811S7 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ubp1Q811S7 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Ubp1Q811S7 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ubp1Q811S7 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ubp1Q811S7 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ubp1Q811S7 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ubp1Q811S7 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ubp1Q811S7 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ubp1Q811S7 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ubp1Q811S7 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ubp1Q811S7 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ubp1Q811S7 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ubp1Q811S7 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ubp1Q811S7 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ubp1Q811S7 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Ubp1Q811S7 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ubp1Q811S7 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ubp1Q811S7 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.74□□□□□ -0.37
Ubp1Q811S7 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ubp1Q811S7 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ubp1Q811S7 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.74□□□□□ -0.37
Ubp1Q811S7 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.74□□□□□ -0.37
Ubp1Q811S7 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ubp1Q811S7 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ubp1Q811S7 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.74□□□□□ -0.37
Ubp1Q811S7 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ubp1Q811S7 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ubp1Q811S7 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ubp1Q811S7 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ubp1Q811S7 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ubp1Q811S7 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ubp1Q811S7 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ubp1Q811S7 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms