Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim62Q80V85 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim62Q80V85 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim62Q80V85 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim62Q80V85 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim62Q80V85 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim62Q80V85 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim62Q80V85 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim62Q80V85 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim62Q80V85 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim62Q80V85 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim62Q80V85 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim62Q80V85 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim62Q80V85 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim62Q80V85 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim62Q80V85 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim62Q80V85 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim62Q80V85 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim62Q80V85 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trim62Q80V85 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim62Q80V85 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim62Q80V85 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim62Q80V85 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim62Q80V85 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim62Q80V85 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.34□□□□□ -0.27
Trim62Q80V85 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Trim62Q80V85 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim62Q80V85 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.34□□□□□ -0.27
Trim62Q80V85 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.34□□□□□ -0.27
Trim62Q80V85 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Trim62Q80V85 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim62Q80V85 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim62Q80V85 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim62Q80V85 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim62Q80V85 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim62Q80V85 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim62Q80V85 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim62Q80V85 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim62Q80V85 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim62Q80V85 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim62Q80V85 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim62Q80V85 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim62Q80V85 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim62Q80V85 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim62Q80V85 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim62Q80V85 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim62Q80V85 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim62Q80V85 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim62Q80V85 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim62Q80V85 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim62Q80V85 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim62Q80V85 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim62Q80V85 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim62Q80V85 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim62Q80V85 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trim62Q80V85 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim62Q80V85 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim62Q80V85 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim62Q80V85 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim62Q80V85 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trim62Q80V85 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim62Q80V85 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.33□□□□□ -0.28
Trim62Q80V85 Gm8062-201ENSMUST00000139696 444 ntBASIC13.33□□□□□ -0.28
Trim62Q80V85 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim62Q80V85 Gm17420-201ENSMUST00000164753 153 ntBASIC13.33□□□□□ -0.28
Trim62Q80V85 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.33□□□□□ -0.28
Trim62Q80V85 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim62Q80V85 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim62Q80V85 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim62Q80V85 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim62Q80V85 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim62Q80V85 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trim62Q80V85 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim62Q80V85 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim62Q80V85 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim62Q80V85 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.33□□□□□ -0.28
Trim62Q80V85 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.33□□□□□ -0.28
Trim62Q80V85 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim62Q80V85 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim62Q80V85 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim62Q80V85 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim62Q80V85 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim62Q80V85 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim62Q80V85 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim62Q80V85 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.33□□□□□ -0.28
Trim62Q80V85 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim62Q80V85 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim62Q80V85 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim62Q80V85 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim62Q80V85 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.33□□□□□ -0.28
Trim62Q80V85 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trim62Q80V85 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim62Q80V85 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Trim62Q80V85 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim62Q80V85 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim62Q80V85 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim62Q80V85 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim62Q80V85 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim62Q80V85 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim62Q80V85 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms