Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Gm21769-201ENSMUST00000211922 111 ntBASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Gm24526-201ENSMUST00000082921 158 ntBASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ubfd1Q78JW9 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ubfd1Q78JW9 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ubfd1Q78JW9 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ubfd1Q78JW9 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ubfd1Q78JW9 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ubfd1Q78JW9 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.57□□□□□ -0.4
Ubfd1Q78JW9 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.57□□□□□ -0.4
Ubfd1Q78JW9 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ubfd1Q78JW9 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Ubfd1Q78JW9 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ubfd1Q78JW9 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ubfd1Q78JW9 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ubfd1Q78JW9 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.57□□□□□ -0.4
Ubfd1Q78JW9 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ubfd1Q78JW9 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.57□□□□□ -0.4
Ubfd1Q78JW9 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.57□□□□□ -0.4
Ubfd1Q78JW9 Gm11964-201ENSMUST00000120982 444 ntBASIC12.57□□□□□ -0.4
Ubfd1Q78JW9 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Ubfd1Q78JW9 Gm13316-201ENSMUST00000140537 691 ntBASIC12.57□□□□□ -0.4
Ubfd1Q78JW9 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ubfd1Q78JW9 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.57□□□□□ -0.4
Ubfd1Q78JW9 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ubfd1Q78JW9 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.57□□□□□ -0.4
Ubfd1Q78JW9 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ubfd1Q78JW9 Gm9257-201ENSMUST00000221254 232 ntBASIC12.57□□□□□ -0.4
Ubfd1Q78JW9 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ubfd1Q78JW9 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ubfd1Q78JW9 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ubfd1Q78JW9 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ubfd1Q78JW9 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ubfd1Q78JW9 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ubfd1Q78JW9 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ubfd1Q78JW9 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Ubfd1Q78JW9 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ubfd1Q78JW9 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ubfd1Q78JW9 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ubfd1Q78JW9 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ubfd1Q78JW9 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Ubfd1Q78JW9 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ubfd1Q78JW9 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.57□□□□□ -0.4
Ubfd1Q78JW9 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ubfd1Q78JW9 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 Gm7584-201ENSMUST00000175829 940 ntBASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 Gm38092-201ENSMUST00000195600 653 ntBASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 Mir339-201ENSMUST00000083659 96 ntBASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.56□□□□□ -0.4
Ubfd1Q78JW9 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms