Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scaf4Q6PFF0 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scaf4Q6PFF0 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Scaf4Q6PFF0 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.72□□□□□ -0.37
Scaf4Q6PFF0 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Scaf4Q6PFF0 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scaf4Q6PFF0 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scaf4Q6PFF0 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.72□□□□□ -0.37
Scaf4Q6PFF0 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Scaf4Q6PFF0 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scaf4Q6PFF0 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scaf4Q6PFF0 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scaf4Q6PFF0 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scaf4Q6PFF0 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Scaf4Q6PFF0 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Scaf4Q6PFF0 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.72□□□□□ -0.37
Scaf4Q6PFF0 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.72□□□□□ -0.37
Scaf4Q6PFF0 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.72□□□□□ -0.37
Scaf4Q6PFF0 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.72□□□□□ -0.37
Scaf4Q6PFF0 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scaf4Q6PFF0 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scaf4Q6PFF0 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scaf4Q6PFF0 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scaf4Q6PFF0 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scaf4Q6PFF0 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scaf4Q6PFF0 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.72□□□□□ -0.37
Scaf4Q6PFF0 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scaf4Q6PFF0 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scaf4Q6PFF0 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scaf4Q6PFF0 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scaf4Q6PFF0 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scaf4Q6PFF0 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.71□□□□□ -0.37
Scaf4Q6PFF0 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Scaf4Q6PFF0 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scaf4Q6PFF0 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Scaf4Q6PFF0 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.71□□□□□ -0.37
Scaf4Q6PFF0 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scaf4Q6PFF0 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.71□□□□□ -0.37
Scaf4Q6PFF0 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scaf4Q6PFF0 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scaf4Q6PFF0 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.71□□□□□ -0.37
Scaf4Q6PFF0 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scaf4Q6PFF0 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.71□□□□□ -0.37
Scaf4Q6PFF0 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.71□□□□□ -0.37
Scaf4Q6PFF0 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.71□□□□□ -0.37
Scaf4Q6PFF0 Gm42790-201ENSMUST00000201268 969 ntBASIC12.71□□□□□ -0.37
Scaf4Q6PFF0 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Scaf4Q6PFF0 Gm9797-201ENSMUST00000052902 613 ntBASIC12.71□□□□□ -0.37
Scaf4Q6PFF0 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scaf4Q6PFF0 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scaf4Q6PFF0 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scaf4Q6PFF0 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.71□□□□□ -0.37
Scaf4Q6PFF0 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scaf4Q6PFF0 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Scaf4Q6PFF0 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scaf4Q6PFF0 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Scaf4Q6PFF0 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
Scaf4Q6PFF0 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Scaf4Q6PFF0 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Scaf4Q6PFF0 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 Gm13813-201ENSMUST00000120998 787 ntBASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 Gm26308-201ENSMUST00000157768 69 ntBASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 Gm20445-201ENSMUST00000061905 565 ntBASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Scaf4Q6PFF0 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms