Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.99□□□□□ -0.33
Rad54bQ6PFE3 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rad54bQ6PFE3 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rad54bQ6PFE3 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Rad54bQ6PFE3 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.99□□□□□ -0.33
Rad54bQ6PFE3 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Rad54bQ6PFE3 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Rad54bQ6PFE3 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Rad54bQ6PFE3 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rad54bQ6PFE3 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rad54bQ6PFE3 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Rad54bQ6PFE3 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rad54bQ6PFE3 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rad54bQ6PFE3 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Rad54bQ6PFE3 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Rad54bQ6PFE3 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Rad54bQ6PFE3 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rad54bQ6PFE3 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rad54bQ6PFE3 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Rad54bQ6PFE3 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Rad54bQ6PFE3 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.98□□□□□ -0.33
Rad54bQ6PFE3 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rad54bQ6PFE3 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rad54bQ6PFE3 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rad54bQ6PFE3 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Rad54bQ6PFE3 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rad54bQ6PFE3 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rad54bQ6PFE3 Gm14921-201ENSMUST00000118643 908 ntBASIC12.98□□□□□ -0.33
Rad54bQ6PFE3 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rad54bQ6PFE3 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rad54bQ6PFE3 Gm2495-201ENSMUST00000191160 466 ntBASIC12.98□□□□□ -0.33
Rad54bQ6PFE3 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.98□□□□□ -0.33
Rad54bQ6PFE3 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.98□□□□□ -0.33
Rad54bQ6PFE3 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.98□□□□□ -0.33
Rad54bQ6PFE3 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rad54bQ6PFE3 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Rad54bQ6PFE3 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rad54bQ6PFE3 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rad54bQ6PFE3 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Rad54bQ6PFE3 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rad54bQ6PFE3 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Rad54bQ6PFE3 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Rad54bQ6PFE3 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rad54bQ6PFE3 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rad54bQ6PFE3 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.97□□□□□ -0.33
Rad54bQ6PFE3 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rad54bQ6PFE3 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rad54bQ6PFE3 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rad54bQ6PFE3 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rad54bQ6PFE3 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rad54bQ6PFE3 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rad54bQ6PFE3 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.97□□□□□ -0.33
Rad54bQ6PFE3 Gm44855-201ENSMUST00000205725 362 ntBASIC12.97□□□□□ -0.33
Rad54bQ6PFE3 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.97□□□□□ -0.33
Rad54bQ6PFE3 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rad54bQ6PFE3 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rad54bQ6PFE3 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rad54bQ6PFE3 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rad54bQ6PFE3 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rad54bQ6PFE3 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rad54bQ6PFE3 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rad54bQ6PFE3 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rad54bQ6PFE3 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rad54bQ6PFE3 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rad54bQ6PFE3 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rad54bQ6PFE3 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rad54bQ6PFE3 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rad54bQ6PFE3 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rad54bQ6PFE3 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rad54bQ6PFE3 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rad54bQ6PFE3 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rad54bQ6PFE3 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Rad54bQ6PFE3 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rad54bQ6PFE3 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rad54bQ6PFE3 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Rad54bQ6PFE3 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rad54bQ6PFE3 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rad54bQ6PFE3 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.96□□□□□ -0.33
Rad54bQ6PFE3 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rad54bQ6PFE3 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rad54bQ6PFE3 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Rad54bQ6PFE3 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.96□□□□□ -0.33
Rad54bQ6PFE3 Gm14057-201ENSMUST00000120631 482 ntBASIC12.96□□□□□ -0.33
Rad54bQ6PFE3 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rad54bQ6PFE3 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.96□□□□□ -0.33
Rad54bQ6PFE3 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rad54bQ6PFE3 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.96□□□□□ -0.33
Rad54bQ6PFE3 Gm37917-201ENSMUST00000194711 392 ntBASIC12.96□□□□□ -0.33
Rad54bQ6PFE3 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.96□□□□□ -0.33
Rad54bQ6PFE3 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rad54bQ6PFE3 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Rad54bQ6PFE3 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Rad54bQ6PFE3 Mir339-201ENSMUST00000083659 96 ntBASIC12.96□□□□□ -0.33
Rad54bQ6PFE3 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rad54bQ6PFE3 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rad54bQ6PFE3 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Rad54bQ6PFE3 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rad54bQ6PFE3 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rad54bQ6PFE3 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.96□□□□□ -0.34
Rad54bQ6PFE3 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms