Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Snrnp40Q6PE01 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Snrnp40Q6PE01 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Snrnp40Q6PE01 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Snrnp40Q6PE01 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.33□□□□□ -0.6
Snrnp40Q6PE01 Gm12266-201ENSMUST00000120311 962 ntBASIC11.33□□□□□ -0.6
Snrnp40Q6PE01 Gm17040-202ENSMUST00000170597 889 ntBASIC11.33□□□□□ -0.6
Snrnp40Q6PE01 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Snrnp40Q6PE01 Mir7221-201ENSMUST00000184009 72 ntBASIC11.33□□□□□ -0.6
Snrnp40Q6PE01 Gm37835-201ENSMUST00000193305 361 ntBASIC11.33□□□□□ -0.6
Snrnp40Q6PE01 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.33□□□□□ -0.6
Snrnp40Q6PE01 Gm18730-201ENSMUST00000218038 343 ntBASIC11.33□□□□□ -0.6
Snrnp40Q6PE01 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Snrnp40Q6PE01 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Snrnp40Q6PE01 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Snrnp40Q6PE01 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Snrnp40Q6PE01 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Snrnp40Q6PE01 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Snrnp40Q6PE01 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Snrnp40Q6PE01 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Snrnp40Q6PE01 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Snrnp40Q6PE01 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Snrnp40Q6PE01 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Snrnp40Q6PE01 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Snrnp40Q6PE01 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.33□□□□□ -0.6
Snrnp40Q6PE01 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Snrnp40Q6PE01 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Snrnp40Q6PE01 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Snrnp40Q6PE01 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Snrnp40Q6PE01 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Snrnp40Q6PE01 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Gm12291-201ENSMUST00000121627 311 ntBASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Gm6963-201ENSMUST00000147879 379 ntBASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Gm7467-201ENSMUST00000185173 652 ntBASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Gm43830-201ENSMUST00000198760 1067 ntBASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Gm19931-201ENSMUST00000198920 368 ntBASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Snrnp40Q6PE01 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Snrnp40Q6PE01 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Snrnp40Q6PE01 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Snrnp40Q6PE01 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Snrnp40Q6PE01 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Snrnp40Q6PE01 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.31□□□□□ -0.6
Snrnp40Q6PE01 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Snrnp40Q6PE01 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Snrnp40Q6PE01 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Snrnp40Q6PE01 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.31□□□□□ -0.6
Snrnp40Q6PE01 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Snrnp40Q6PE01 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Snrnp40Q6PE01 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.31□□□□□ -0.6
Snrnp40Q6PE01 Gm14999-201ENSMUST00000121039 624 ntBASIC11.31□□□□□ -0.6
Snrnp40Q6PE01 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Snrnp40Q6PE01 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Snrnp40Q6PE01 Gm23699-201ENSMUST00000158835 135 ntBASIC11.31□□□□□ -0.6
Snrnp40Q6PE01 Gm8018-201ENSMUST00000173536 789 ntBASIC11.31□□□□□ -0.6
Snrnp40Q6PE01 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms