Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smarcd3Q6P9Z1 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Smarcd3Q6P9Z1 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smarcd3Q6P9Z1 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smarcd3Q6P9Z1 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Smarcd3Q6P9Z1 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.84□□□□□ -0.51
Smarcd3Q6P9Z1 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smarcd3Q6P9Z1 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smarcd3Q6P9Z1 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smarcd3Q6P9Z1 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Smarcd3Q6P9Z1 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smarcd3Q6P9Z1 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smarcd3Q6P9Z1 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.84□□□□□ -0.51
Smarcd3Q6P9Z1 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smarcd3Q6P9Z1 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.84□□□□□ -0.51
Smarcd3Q6P9Z1 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Smarcd3Q6P9Z1 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Smarcd3Q6P9Z1 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.84□□□□□ -0.51
Smarcd3Q6P9Z1 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smarcd3Q6P9Z1 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smarcd3Q6P9Z1 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smarcd3Q6P9Z1 Gm22189-201ENSMUST00000103822 86 ntBASIC11.84□□□□□ -0.51
Smarcd3Q6P9Z1 Gm14057-201ENSMUST00000120631 482 ntBASIC11.84□□□□□ -0.51
Smarcd3Q6P9Z1 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smarcd3Q6P9Z1 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.84□□□□□ -0.51
Smarcd3Q6P9Z1 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.84□□□□□ -0.51
Smarcd3Q6P9Z1 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smarcd3Q6P9Z1 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smarcd3Q6P9Z1 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.84□□□□□ -0.51
Smarcd3Q6P9Z1 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smarcd3Q6P9Z1 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.84□□□□□ -0.51
Smarcd3Q6P9Z1 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smarcd3Q6P9Z1 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smarcd3Q6P9Z1 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.84□□□□□ -0.51
Smarcd3Q6P9Z1 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smarcd3Q6P9Z1 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smarcd3Q6P9Z1 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smarcd3Q6P9Z1 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smarcd3Q6P9Z1 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smarcd3Q6P9Z1 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smarcd3Q6P9Z1 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smarcd3Q6P9Z1 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smarcd3Q6P9Z1 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smarcd3Q6P9Z1 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.84□□□□□ -0.51
Smarcd3Q6P9Z1 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Smarcd3Q6P9Z1 Syt7-204ENSMUST00000223586 1344 ntBASIC11.84□□□□□ -0.51
Smarcd3Q6P9Z1 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smarcd3Q6P9Z1 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Smarcd3Q6P9Z1 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Smarcd3Q6P9Z1 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Smarcd3Q6P9Z1 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Smarcd3Q6P9Z1 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smarcd3Q6P9Z1 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Smarcd3Q6P9Z1 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smarcd3Q6P9Z1 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smarcd3Q6P9Z1 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.83□□□□□ -0.52
Smarcd3Q6P9Z1 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Smarcd3Q6P9Z1 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smarcd3Q6P9Z1 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smarcd3Q6P9Z1 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smarcd3Q6P9Z1 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Smarcd3Q6P9Z1 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smarcd3Q6P9Z1 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smarcd3Q6P9Z1 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smarcd3Q6P9Z1 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smarcd3Q6P9Z1 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Smarcd3Q6P9Z1 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Smarcd3Q6P9Z1 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.83□□□□□ -0.52
Smarcd3Q6P9Z1 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Smarcd3Q6P9Z1 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Smarcd3Q6P9Z1 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smarcd3Q6P9Z1 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smarcd3Q6P9Z1 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smarcd3Q6P9Z1 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smarcd3Q6P9Z1 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC11.83□□□□□ -0.52
Smarcd3Q6P9Z1 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Smarcd3Q6P9Z1 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Smarcd3Q6P9Z1 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Smarcd3Q6P9Z1 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.83□□□□□ -0.52
Smarcd3Q6P9Z1 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
Smarcd3Q6P9Z1 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.83□□□□□ -0.52
Smarcd3Q6P9Z1 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smarcd3Q6P9Z1 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Smarcd3Q6P9Z1 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Smarcd3Q6P9Z1 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.82□□□□□ -0.52
Smarcd3Q6P9Z1 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms