Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp49Q6P9L4 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.44□□□□□ -0.1
Usp49Q6P9L4 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14.44□□□□□ -0.1
Usp49Q6P9L4 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Usp49Q6P9L4 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp49Q6P9L4 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp49Q6P9L4 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp49Q6P9L4 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp49Q6P9L4 Gm14704-201ENSMUST00000120300 874 ntBASIC14.44□□□□□ -0.1
Usp49Q6P9L4 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp49Q6P9L4 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp49Q6P9L4 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp49Q6P9L4 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp49Q6P9L4 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.44□□□□□ -0.1
Usp49Q6P9L4 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC14.44□□□□□ -0.1
Usp49Q6P9L4 Gm7029-201ENSMUST00000173226 450 ntBASIC14.44□□□□□ -0.1
Usp49Q6P9L4 Gm29705-201ENSMUST00000212598 474 ntBASIC14.44□□□□□ -0.1
Usp49Q6P9L4 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp49Q6P9L4 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp49Q6P9L4 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp49Q6P9L4 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp49Q6P9L4 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Usp49Q6P9L4 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp49Q6P9L4 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Usp49Q6P9L4 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Usp49Q6P9L4 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.44□□□□□ -0.1
Usp49Q6P9L4 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Usp49Q6P9L4 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Usp49Q6P9L4 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp49Q6P9L4 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Usp49Q6P9L4 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Usp49Q6P9L4 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.43□□□□□ -0.1
Usp49Q6P9L4 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp49Q6P9L4 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp49Q6P9L4 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp49Q6P9L4 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp49Q6P9L4 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC14.43□□□□□ -0.1
Usp49Q6P9L4 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Usp49Q6P9L4 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.43□□□□□ -0.1
Usp49Q6P9L4 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.43□□□□□ -0.1
Usp49Q6P9L4 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Usp49Q6P9L4 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp49Q6P9L4 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.43□□□□□ -0.1
Usp49Q6P9L4 Mir7085-201ENSMUST00000184353 66 ntBASIC14.43□□□□□ -0.1
Usp49Q6P9L4 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.43□□□□□ -0.1
Usp49Q6P9L4 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.43□□□□□ -0.1
Usp49Q6P9L4 Gm2824-203ENSMUST00000226189 1228 ntBASIC14.43□□□□□ -0.1
Usp49Q6P9L4 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC14.43□□□□□ -0.1
Usp49Q6P9L4 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp49Q6P9L4 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp49Q6P9L4 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp49Q6P9L4 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp49Q6P9L4 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp49Q6P9L4 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp49Q6P9L4 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp49Q6P9L4 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Usp49Q6P9L4 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp49Q6P9L4 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp49Q6P9L4 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp49Q6P9L4 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp49Q6P9L4 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Usp49Q6P9L4 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.43□□□□□ -0.1
Usp49Q6P9L4 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp49Q6P9L4 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp49Q6P9L4 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Usp49Q6P9L4 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Usp49Q6P9L4 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp49Q6P9L4 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp49Q6P9L4 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp49Q6P9L4 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp49Q6P9L4 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp49Q6P9L4 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp49Q6P9L4 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp49Q6P9L4 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp49Q6P9L4 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Usp49Q6P9L4 Gm12363-201ENSMUST00000122250 668 ntBASIC14.42□□□□□ -0.1
Usp49Q6P9L4 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usp49Q6P9L4 Gm24644-201ENSMUST00000157114 139 ntBASIC14.42□□□□□ -0.1
Usp49Q6P9L4 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.42□□□□□ -0.1
Usp49Q6P9L4 Gm27847-201ENSMUST00000183711 107 ntBASIC14.42□□□□□ -0.1
Usp49Q6P9L4 Gm27375-201ENSMUST00000183799 107 ntBASIC14.42□□□□□ -0.1
Usp49Q6P9L4 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14.42□□□□□ -0.1
Usp49Q6P9L4 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC14.42□□□□□ -0.1
Usp49Q6P9L4 Gm18062-201ENSMUST00000208020 547 ntBASIC14.42□□□□□ -0.1
Usp49Q6P9L4 Gm18055-201ENSMUST00000208254 547 ntBASIC14.42□□□□□ -0.1
Usp49Q6P9L4 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC14.42□□□□□ -0.1
Usp49Q6P9L4 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp49Q6P9L4 Mir339-201ENSMUST00000083659 96 ntBASIC14.42□□□□□ -0.1
Usp49Q6P9L4 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Usp49Q6P9L4 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usp49Q6P9L4 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp49Q6P9L4 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp49Q6P9L4 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp49Q6P9L4 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp49Q6P9L4 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp49Q6P9L4 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp49Q6P9L4 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usp49Q6P9L4 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp49Q6P9L4 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp49Q6P9L4 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms