Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.71□□□□□ -0.37
VclQ64727 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VclQ64727 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
VclQ64727 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
VclQ64727 Gm12957-201ENSMUST00000117835 377 ntBASIC12.71□□□□□ -0.37
VclQ64727 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.71□□□□□ -0.37
VclQ64727 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VclQ64727 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.71□□□□□ -0.37
VclQ64727 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.71□□□□□ -0.37
VclQ64727 Gm19163-201ENSMUST00000223313 780 ntBASIC12.71□□□□□ -0.37
VclQ64727 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VclQ64727 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VclQ64727 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VclQ64727 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
VclQ64727 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VclQ64727 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
VclQ64727 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.71□□□□□ -0.38
VclQ64727 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
VclQ64727 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
VclQ64727 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
VclQ64727 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
VclQ64727 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.38
VclQ64727 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
VclQ64727 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
VclQ64727 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
VclQ64727 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
VclQ64727 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VclQ64727 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VclQ64727 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
VclQ64727 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VclQ64727 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.7□□□□□ -0.38
VclQ64727 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
VclQ64727 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
VclQ64727 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.7□□□□□ -0.38
VclQ64727 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VclQ64727 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VclQ64727 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
VclQ64727 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VclQ64727 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
VclQ64727 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VclQ64727 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
VclQ64727 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VclQ64727 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VclQ64727 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
VclQ64727 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VclQ64727 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VclQ64727 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
VclQ64727 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VclQ64727 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
VclQ64727 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
VclQ64727 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VclQ64727 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VclQ64727 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.7□□□□□ -0.38
VclQ64727 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VclQ64727 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VclQ64727 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VclQ64727 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
VclQ64727 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VclQ64727 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VclQ64727 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
VclQ64727 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.69□□□□□ -0.38
VclQ64727 Mir686-201ENSMUST00000102174 109 ntBASIC12.69□□□□□ -0.38
VclQ64727 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
VclQ64727 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.69□□□□□ -0.38
VclQ64727 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
VclQ64727 Gm17420-201ENSMUST00000164753 153 ntBASIC12.69□□□□□ -0.38
VclQ64727 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VclQ64727 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.69□□□□□ -0.38
VclQ64727 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.69□□□□□ -0.38
VclQ64727 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.69□□□□□ -0.38
VclQ64727 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.69□□□□□ -0.38
VclQ64727 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VclQ64727 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VclQ64727 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
VclQ64727 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
VclQ64727 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
VclQ64727 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VclQ64727 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VclQ64727 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
VclQ64727 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
VclQ64727 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
VclQ64727 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
VclQ64727 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
VclQ64727 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.69□□□□□ -0.38
VclQ64727 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VclQ64727 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VclQ64727 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
VclQ64727 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
VclQ64727 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
VclQ64727 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VclQ64727 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VclQ64727 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VclQ64727 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VclQ64727 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VclQ64727 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
VclQ64727 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
VclQ64727 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.68□□□□□ -0.38
VclQ64727 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
VclQ64727 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VclQ64727 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms