Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Gm16296-201ENSMUST00000159905 325 ntBASIC15.82■□□□□ 0.12
Trim27Q62158 Gm5745-201ENSMUST00000183748 313 ntBASIC15.82■□□□□ 0.12
Trim27Q62158 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim27Q62158 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC15.82■□□□□ 0.12
Trim27Q62158 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC15.82■□□□□ 0.12
Trim27Q62158 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim27Q62158 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim27Q62158 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim27Q62158 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trim27Q62158 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trim27Q62158 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim27Q62158 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim27Q62158 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Trim27Q62158 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim27Q62158 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim27Q62158 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim27Q62158 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim27Q62158 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim27Q62158 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC15.81■□□□□ 0.12
Trim27Q62158 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim27Q62158 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trim27Q62158 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim27Q62158 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim27Q62158 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim27Q62158 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim27Q62158 Gm1335-201ENSMUST00000121653 386 ntBASIC15.81■□□□□ 0.12
Trim27Q62158 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim27Q62158 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim27Q62158 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trim27Q62158 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trim27Q62158 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Trim27Q62158 AC022775.2-201ENSMUST00000227885 646 ntBASIC15.81■□□□□ 0.12
Trim27Q62158 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim27Q62158 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim27Q62158 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim27Q62158 Gm10268-201ENSMUST00000085340 555 ntBASIC15.81■□□□□ 0.12
Trim27Q62158 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Trim27Q62158 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trim27Q62158 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim27Q62158 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trim27Q62158 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim27Q62158 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim27Q62158 Gm10339-203ENSMUST00000225409 1671 ntBASIC15.8■□□□□ 0.12
Trim27Q62158 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim27Q62158 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim27Q62158 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim27Q62158 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC15.8■□□□□ 0.12
Trim27Q62158 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim27Q62158 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim27Q62158 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC15.8■□□□□ 0.12
Trim27Q62158 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim27Q62158 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Trim27Q62158 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Trim27Q62158 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim27Q62158 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC15.8■□□□□ 0.12
Trim27Q62158 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Trim27Q62158 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trim27Q62158 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC15.8■□□□□ 0.12
Trim27Q62158 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC15.8■□□□□ 0.12
Trim27Q62158 Gm38230-201ENSMUST00000193572 1159 ntBASIC15.8■□□□□ 0.12
Trim27Q62158 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC15.8■□□□□ 0.12
Trim27Q62158 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Trim27Q62158 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trim27Q62158 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim27Q62158 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim27Q62158 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim27Q62158 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim27Q62158 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trim27Q62158 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim27Q62158 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim27Q62158 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Trim27Q62158 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim27Q62158 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC15.79■□□□□ 0.12
Trim27Q62158 AC114008.2-201ENSMUST00000227699 1347 ntBASIC15.79■□□□□ 0.12
Trim27Q62158 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim27Q62158 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim27Q62158 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC15.79■□□□□ 0.12
Trim27Q62158 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim27Q62158 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC15.79■□□□□ 0.12
Trim27Q62158 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim27Q62158 Gm38092-201ENSMUST00000195600 653 ntBASIC15.79■□□□□ 0.12
Trim27Q62158 Gm9299-201ENSMUST00000206392 1140 ntBASIC15.79■□□□□ 0.12
Trim27Q62158 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim27Q62158 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC15.79■□□□□ 0.12
Trim27Q62158 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim27Q62158 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim27Q62158 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim27Q62158 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim27Q62158 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trim27Q62158 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim27Q62158 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC15.79■□□□□ 0.12
Trim27Q62158 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim27Q62158 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trim27Q62158 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim27Q62158 Gm45266-201ENSMUST00000210111 2173 ntBASIC15.79■□□□□ 0.12
Trim27Q62158 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
Trim27Q62158 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
Trim27Q62158 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim27Q62158 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim27Q62158 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms