Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.41□□□□□ -0.42
ClpbQ60649 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClpbQ60649 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClpbQ60649 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClpbQ60649 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClpbQ60649 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
ClpbQ60649 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.4□□□□□ -0.42
ClpbQ60649 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClpbQ60649 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClpbQ60649 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
ClpbQ60649 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClpbQ60649 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
ClpbQ60649 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClpbQ60649 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.4□□□□□ -0.42
ClpbQ60649 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.4□□□□□ -0.42
ClpbQ60649 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClpbQ60649 Gm13226-201ENSMUST00000117838 404 ntBASIC12.4□□□□□ -0.42
ClpbQ60649 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClpbQ60649 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
ClpbQ60649 Gm29127-201ENSMUST00000188304 517 ntBASIC12.4□□□□□ -0.42
ClpbQ60649 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.4□□□□□ -0.42
ClpbQ60649 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClpbQ60649 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClpbQ60649 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClpbQ60649 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.4□□□□□ -0.42
ClpbQ60649 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
ClpbQ60649 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClpbQ60649 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
ClpbQ60649 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
ClpbQ60649 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClpbQ60649 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.4□□□□□ -0.42
ClpbQ60649 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClpbQ60649 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.4□□□□□ -0.42
ClpbQ60649 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClpbQ60649 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
ClpbQ60649 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.4□□□□□ -0.43
ClpbQ60649 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ClpbQ60649 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
ClpbQ60649 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ClpbQ60649 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClpbQ60649 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClpbQ60649 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClpbQ60649 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.39□□□□□ -0.43
ClpbQ60649 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClpbQ60649 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClpbQ60649 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.39□□□□□ -0.43
ClpbQ60649 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ClpbQ60649 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.39□□□□□ -0.43
ClpbQ60649 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClpbQ60649 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClpbQ60649 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClpbQ60649 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.39□□□□□ -0.43
ClpbQ60649 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClpbQ60649 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.39□□□□□ -0.43
ClpbQ60649 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClpbQ60649 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
ClpbQ60649 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.39□□□□□ -0.43
ClpbQ60649 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.39□□□□□ -0.43
ClpbQ60649 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ClpbQ60649 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.39□□□□□ -0.43
ClpbQ60649 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
ClpbQ60649 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.39□□□□□ -0.43
ClpbQ60649 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.39□□□□□ -0.43
ClpbQ60649 Gm43818-201ENSMUST00000200605 466 ntBASIC12.39□□□□□ -0.43
ClpbQ60649 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.39□□□□□ -0.43
ClpbQ60649 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.39□□□□□ -0.43
ClpbQ60649 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClpbQ60649 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
ClpbQ60649 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
ClpbQ60649 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClpbQ60649 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
ClpbQ60649 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClpbQ60649 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
ClpbQ60649 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
ClpbQ60649 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClpbQ60649 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.39□□□□□ -0.43
ClpbQ60649 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
ClpbQ60649 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
ClpbQ60649 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
ClpbQ60649 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.38□□□□□ -0.43
ClpbQ60649 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClpbQ60649 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.38□□□□□ -0.43
ClpbQ60649 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
ClpbQ60649 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClpbQ60649 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
ClpbQ60649 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ClpbQ60649 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.38□□□□□ -0.43
ClpbQ60649 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.38□□□□□ -0.43
ClpbQ60649 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClpbQ60649 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClpbQ60649 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClpbQ60649 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClpbQ60649 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClpbQ60649 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
ClpbQ60649 Gm12742-201ENSMUST00000117326 410 ntBASIC12.38□□□□□ -0.43
ClpbQ60649 Gm16202-201ENSMUST00000117532 544 ntBASIC12.38□□□□□ -0.43
ClpbQ60649 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
ClpbQ60649 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.38□□□□□ -0.43
ClpbQ60649 Gm27731-201ENSMUST00000185192 107 ntBASIC12.38□□□□□ -0.43
ClpbQ60649 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms