Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf38aQ4FK66 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Prpf38aQ4FK66 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Prpf38aQ4FK66 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf38aQ4FK66 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf38aQ4FK66 Gm37827-201ENSMUST00000194486 1542 ntBASIC15.06■□□□□ 0
Prpf38aQ4FK66 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Prpf38aQ4FK66 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Prpf38aQ4FK66 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Prpf38aQ4FK66 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.06■□□□□ 0
Prpf38aQ4FK66 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Prpf38aQ4FK66 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC15.05■□□□□ 0
Prpf38aQ4FK66 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC15.05■□□□□ 0
Prpf38aQ4FK66 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Prpf38aQ4FK66 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Prpf38aQ4FK66 Gm44094-201ENSMUST00000204703 2030 ntBASIC15.05■□□□□ 0
Prpf38aQ4FK66 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Prpf38aQ4FK66 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Prpf38aQ4FK66 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Prpf38aQ4FK66 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Prpf38aQ4FK66 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Prpf38aQ4FK66 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Prpf38aQ4FK66 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
Prpf38aQ4FK66 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Prpf38aQ4FK66 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC15.05■□□□□ -0
Prpf38aQ4FK66 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Prpf38aQ4FK66 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC15.05■□□□□ -0
Prpf38aQ4FK66 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC15.05■□□□□ -0
Prpf38aQ4FK66 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC15.05■□□□□ -0
Prpf38aQ4FK66 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC15.05■□□□□ -0
Prpf38aQ4FK66 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Prpf38aQ4FK66 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Prpf38aQ4FK66 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Prpf38aQ4FK66 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC15.05■□□□□ -0
Prpf38aQ4FK66 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Prpf38aQ4FK66 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Prpf38aQ4FK66 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Prpf38aQ4FK66 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Prpf38aQ4FK66 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Prpf38aQ4FK66 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Prpf38aQ4FK66 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC15.05■□□□□ -0
Prpf38aQ4FK66 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC15.05■□□□□ -0
Prpf38aQ4FK66 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC15.05■□□□□ -0
Prpf38aQ4FK66 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Prpf38aQ4FK66 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf38aQ4FK66 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf38aQ4FK66 Gm37795-201ENSMUST00000194216 2459 ntBASIC15.04■□□□□ -0
Prpf38aQ4FK66 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf38aQ4FK66 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf38aQ4FK66 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.04■□□□□ -0
Prpf38aQ4FK66 Gm37437-201ENSMUST00000194451 1937 ntBASIC15.04■□□□□ -0
Prpf38aQ4FK66 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf38aQ4FK66 Gm4366-201ENSMUST00000201488 1342 ntBASIC15.04■□□□□ -0
Prpf38aQ4FK66 Gm3287-205ENSMUST00000228893 1332 ntBASIC15.04■□□□□ -0
Prpf38aQ4FK66 Gm14726-201ENSMUST00000120623 896 ntBASIC15.04■□□□□ -0
Prpf38aQ4FK66 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC15.04■□□□□ -0
Prpf38aQ4FK66 Gm26083-201ENSMUST00000157904 193 ntBASIC15.04■□□□□ -0
Prpf38aQ4FK66 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC15.04■□□□□ -0
Prpf38aQ4FK66 Gm20482-202ENSMUST00000174729 825 ntBASIC15.04■□□□□ -0
Prpf38aQ4FK66 AC167013.1-201ENSMUST00000228592 202 ntBASIC15.04■□□□□ -0
Prpf38aQ4FK66 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf38aQ4FK66 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC15.04■□□□□ -0
Prpf38aQ4FK66 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf38aQ4FK66 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf38aQ4FK66 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC15.04■□□□□ -0
Prpf38aQ4FK66 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC15.04■□□□□ -0
Prpf38aQ4FK66 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Prpf38aQ4FK66 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC15.04■□□□□ -0
Prpf38aQ4FK66 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Prpf38aQ4FK66 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf38aQ4FK66 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf38aQ4FK66 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC15.04■□□□□ -0
Prpf38aQ4FK66 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.04■□□□□ -0
Prpf38aQ4FK66 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf38aQ4FK66 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Prpf38aQ4FK66 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf38aQ4FK66 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf38aQ4FK66 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf38aQ4FK66 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Prpf38aQ4FK66 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf38aQ4FK66 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC15.03■□□□□ -0
Prpf38aQ4FK66 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf38aQ4FK66 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf38aQ4FK66 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf38aQ4FK66 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Prpf38aQ4FK66 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Prpf38aQ4FK66 Gm44891-201ENSMUST00000208817 2223 ntBASIC15.03■□□□□ -0
Prpf38aQ4FK66 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.03■□□□□ -0
Prpf38aQ4FK66 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf38aQ4FK66 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC15.03■□□□□ -0
Prpf38aQ4FK66 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf38aQ4FK66 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC15.03■□□□□ -0
Prpf38aQ4FK66 Gm26956-201ENSMUST00000182176 986 ntBASIC15.03■□□□□ -0
Prpf38aQ4FK66 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC15.03■□□□□ -0
Prpf38aQ4FK66 Gm5950-201ENSMUST00000213337 772 ntBASIC15.03■□□□□ -0
Prpf38aQ4FK66 Gm30285-201ENSMUST00000214614 422 ntBASIC15.03■□□□□ -0
Prpf38aQ4FK66 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC15.03■□□□□ -0
Prpf38aQ4FK66 Gm9004-201ENSMUST00000218739 1222 ntBASIC15.03■□□□□ -0
Prpf38aQ4FK66 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prpf38aQ4FK66 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms