Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Trim43aQ3TL54 Gm44124-201ENSMUST00000204159 472 ntBASIC13.7□□□□□ -0.22
Trim43aQ3TL54 Gm44855-201ENSMUST00000205725 362 ntBASIC13.7□□□□□ -0.22
Trim43aQ3TL54 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.7□□□□□ -0.22
Trim43aQ3TL54 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim43aQ3TL54 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim43aQ3TL54 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.7□□□□□ -0.22
Trim43aQ3TL54 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43aQ3TL54 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43aQ3TL54 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43aQ3TL54 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43aQ3TL54 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43aQ3TL54 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.7□□□□□ -0.22
Trim43aQ3TL54 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43aQ3TL54 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.7□□□□□ -0.22
Trim43aQ3TL54 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43aQ3TL54 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trim43aQ3TL54 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43aQ3TL54 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Trim43aQ3TL54 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trim43aQ3TL54 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43aQ3TL54 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43aQ3TL54 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43aQ3TL54 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43aQ3TL54 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43aQ3TL54 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43aQ3TL54 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43aQ3TL54 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43aQ3TL54 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Trim43aQ3TL54 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.69□□□□□ -0.22
Trim43aQ3TL54 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim43aQ3TL54 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.69□□□□□ -0.22
Trim43aQ3TL54 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim43aQ3TL54 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trim43aQ3TL54 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.69□□□□□ -0.22
Trim43aQ3TL54 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.69□□□□□ -0.22
Trim43aQ3TL54 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43aQ3TL54 Gm2423-201ENSMUST00000074863 733 ntBASIC13.69□□□□□ -0.22
Trim43aQ3TL54 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43aQ3TL54 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.69□□□□□ -0.22
Trim43aQ3TL54 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43aQ3TL54 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43aQ3TL54 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43aQ3TL54 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43aQ3TL54 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trim43aQ3TL54 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.68□□□□□ -0.22
Trim43aQ3TL54 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim43aQ3TL54 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43aQ3TL54 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43aQ3TL54 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43aQ3TL54 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43aQ3TL54 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trim43aQ3TL54 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Trim43aQ3TL54 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trim43aQ3TL54 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43aQ3TL54 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim43aQ3TL54 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43aQ3TL54 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trim43aQ3TL54 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
Trim43aQ3TL54 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim43aQ3TL54 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim43aQ3TL54 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43aQ3TL54 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.68□□□□□ -0.22
Trim43aQ3TL54 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.68□□□□□ -0.22
Trim43aQ3TL54 Gm9522-201ENSMUST00000182394 926 ntBASIC13.68□□□□□ -0.22
Trim43aQ3TL54 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.68□□□□□ -0.22
Trim43aQ3TL54 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.68□□□□□ -0.22
Trim43aQ3TL54 Gm5279-201ENSMUST00000199575 745 ntBASIC13.68□□□□□ -0.22
Trim43aQ3TL54 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.68□□□□□ -0.22
Trim43aQ3TL54 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.68□□□□□ -0.22
Trim43aQ3TL54 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43aQ3TL54 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.68□□□□□ -0.22
Trim43aQ3TL54 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.68□□□□□ -0.22
Trim43aQ3TL54 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trim43aQ3TL54 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trim43aQ3TL54 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43aQ3TL54 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43aQ3TL54 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trim43aQ3TL54 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43aQ3TL54 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.68□□□□□ -0.22
Trim43aQ3TL54 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trim43aQ3TL54 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43aQ3TL54 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.68□□□□□ -0.22
Trim43aQ3TL54 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43aQ3TL54 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43aQ3TL54 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43aQ3TL54 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43aQ3TL54 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.68□□□□□ -0.22
Trim43aQ3TL54 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43aQ3TL54 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trim43aQ3TL54 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43aQ3TL54 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Trim43aQ3TL54 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43aQ3TL54 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43aQ3TL54 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43aQ3TL54 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Trim43aQ3TL54 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43aQ3TL54 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43aQ3TL54 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trim43aQ3TL54 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms