Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smn1P97801 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smn1P97801 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.06□□□□□ -0.64
Smn1P97801 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smn1P97801 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Smn1P97801 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smn1P97801 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Smn1P97801 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smn1P97801 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.05□□□□□ -0.64
Smn1P97801 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smn1P97801 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Smn1P97801 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smn1P97801 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smn1P97801 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Smn1P97801 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smn1P97801 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smn1P97801 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
Smn1P97801 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC11.05□□□□□ -0.64
Smn1P97801 Gm6447-201ENSMUST00000118905 835 ntBASIC11.05□□□□□ -0.64
Smn1P97801 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.05□□□□□ -0.64
Smn1P97801 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.05□□□□□ -0.64
Smn1P97801 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smn1P97801 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smn1P97801 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC11.05□□□□□ -0.64
Smn1P97801 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Smn1P97801 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smn1P97801 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smn1P97801 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.05□□□□□ -0.64
Smn1P97801 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC11.05□□□□□ -0.64
Smn1P97801 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smn1P97801 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Smn1P97801 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smn1P97801 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smn1P97801 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smn1P97801 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
Smn1P97801 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smn1P97801 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Smn1P97801 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.05□□□□□ -0.64
Smn1P97801 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smn1P97801 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smn1P97801 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smn1P97801 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Smn1P97801 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.05□□□□□ -0.64
Smn1P97801 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Smn1P97801 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Smn1P97801 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Smn1P97801 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Smn1P97801 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smn1P97801 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smn1P97801 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.04□□□□□ -0.64
Smn1P97801 Paupar-201ENSMUST00000194826 3482 ntBASIC11.04□□□□□ -0.64
Smn1P97801 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smn1P97801 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smn1P97801 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smn1P97801 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smn1P97801 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smn1P97801 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smn1P97801 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smn1P97801 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.04□□□□□ -0.64
Smn1P97801 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smn1P97801 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC11.04□□□□□ -0.64
Smn1P97801 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.04□□□□□ -0.64
Smn1P97801 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smn1P97801 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smn1P97801 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smn1P97801 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smn1P97801 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.04□□□□□ -0.64
Smn1P97801 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.04□□□□□ -0.64
Smn1P97801 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Smn1P97801 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.04□□□□□ -0.64
Smn1P97801 Gm26464-201ENSMUST00000157094 305 ntBASIC11.04□□□□□ -0.64
Smn1P97801 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC11.04□□□□□ -0.64
Smn1P97801 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smn1P97801 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smn1P97801 Gm27702-201ENSMUST00000184512 56 ntBASIC11.04□□□□□ -0.64
Smn1P97801 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smn1P97801 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.04□□□□□ -0.64
Smn1P97801 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
Smn1P97801 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smn1P97801 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smn1P97801 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smn1P97801 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smn1P97801 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smn1P97801 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smn1P97801 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.04□□□□□ -0.64
Smn1P97801 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.04□□□□□ -0.64
Smn1P97801 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.04□□□□□ -0.64
Smn1P97801 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smn1P97801 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smn1P97801 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smn1P97801 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smn1P97801 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smn1P97801 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Smn1P97801 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Smn1P97801 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.04□□□□□ -0.64
Smn1P97801 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Smn1P97801 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smn1P97801 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Smn1P97801 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Smn1P97801 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms