Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43cP86449 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43cP86449 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.03□□□□□ -0.16
Trim43cP86449 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43cP86449 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trim43cP86449 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim43cP86449 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim43cP86449 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim43cP86449 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim43cP86449 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.02□□□□□ -0.16
Trim43cP86449 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trim43cP86449 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14.02□□□□□ -0.16
Trim43cP86449 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim43cP86449 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.02□□□□□ -0.16
Trim43cP86449 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trim43cP86449 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.02□□□□□ -0.16
Trim43cP86449 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Trim43cP86449 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43cP86449 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43cP86449 Gm23931-201ENSMUST00000103842 109 ntBASIC14.02□□□□□ -0.17
Trim43cP86449 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43cP86449 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43cP86449 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC14.02□□□□□ -0.17
Trim43cP86449 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43cP86449 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Trim43cP86449 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.02□□□□□ -0.17
Trim43cP86449 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.02□□□□□ -0.17
Trim43cP86449 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43cP86449 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43cP86449 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43cP86449 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43cP86449 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Trim43cP86449 Snora73a-201ENSMUST00000082453 205 ntBASIC14.02□□□□□ -0.17
Trim43cP86449 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43cP86449 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43cP86449 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43cP86449 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43cP86449 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43cP86449 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43cP86449 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43cP86449 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Trim43cP86449 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.02□□□□□ -0.17
Trim43cP86449 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43cP86449 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43cP86449 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43cP86449 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trim43cP86449 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43cP86449 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trim43cP86449 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43cP86449 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43cP86449 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43cP86449 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43cP86449 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43cP86449 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43cP86449 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43cP86449 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trim43cP86449 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43cP86449 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trim43cP86449 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43cP86449 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43cP86449 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.01□□□□□ -0.17
Trim43cP86449 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trim43cP86449 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
Trim43cP86449 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43cP86449 Gm1335-201ENSMUST00000121653 386 ntBASIC14.01□□□□□ -0.17
Trim43cP86449 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.01□□□□□ -0.17
Trim43cP86449 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43cP86449 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43cP86449 AC022775.2-201ENSMUST00000227885 646 ntBASIC14.01□□□□□ -0.17
Trim43cP86449 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trim43cP86449 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43cP86449 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43cP86449 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43cP86449 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43cP86449 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trim43cP86449 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43cP86449 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43cP86449 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43cP86449 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trim43cP86449 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43cP86449 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.01□□□□□ -0.17
Trim43cP86449 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.01□□□□□ -0.17
Trim43cP86449 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trim43cP86449 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43cP86449 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43cP86449 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim43cP86449 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim43cP86449 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim43cP86449 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43cP86449 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43cP86449 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trim43cP86449 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trim43cP86449 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43cP86449 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43cP86449 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43cP86449 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim43cP86449 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43cP86449 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim43cP86449 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43cP86449 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms