Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
SgcbP82349 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
SgcbP82349 Gm27682-201ENSMUST00000183930 110 ntBASIC11.53□□□□□ -0.56
SgcbP82349 Mir7085-201ENSMUST00000184353 66 ntBASIC11.53□□□□□ -0.56
SgcbP82349 Gm5370-201ENSMUST00000187187 574 ntBASIC11.53□□□□□ -0.56
SgcbP82349 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC11.53□□□□□ -0.56
SgcbP82349 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.53□□□□□ -0.56
SgcbP82349 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SgcbP82349 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.53□□□□□ -0.56
SgcbP82349 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
SgcbP82349 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
SgcbP82349 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
SgcbP82349 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.53□□□□□ -0.56
SgcbP82349 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
SgcbP82349 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SgcbP82349 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SgcbP82349 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
SgcbP82349 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SgcbP82349 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SgcbP82349 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
SgcbP82349 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SgcbP82349 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
SgcbP82349 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
SgcbP82349 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
SgcbP82349 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
SgcbP82349 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SgcbP82349 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
SgcbP82349 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SgcbP82349 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
SgcbP82349 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
SgcbP82349 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SgcbP82349 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SgcbP82349 Gm5989-201ENSMUST00000096092 2077 ntBASIC11.52□□□□□ -0.57
SgcbP82349 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
SgcbP82349 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SgcbP82349 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SgcbP82349 Gm12957-201ENSMUST00000117835 377 ntBASIC11.52□□□□□ -0.57
SgcbP82349 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC11.52□□□□□ -0.57
SgcbP82349 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SgcbP82349 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.52□□□□□ -0.57
SgcbP82349 Gm17208-201ENSMUST00000168388 535 ntBASIC11.52□□□□□ -0.57
SgcbP82349 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC11.52□□□□□ -0.57
SgcbP82349 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.52□□□□□ -0.57
SgcbP82349 Gm19163-201ENSMUST00000223313 780 ntBASIC11.52□□□□□ -0.57
SgcbP82349 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SgcbP82349 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SgcbP82349 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SgcbP82349 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SgcbP82349 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SgcbP82349 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SgcbP82349 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
SgcbP82349 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SgcbP82349 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SgcbP82349 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
SgcbP82349 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SgcbP82349 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SgcbP82349 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SgcbP82349 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SgcbP82349 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SgcbP82349 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.51□□□□□ -0.57
SgcbP82349 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
SgcbP82349 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SgcbP82349 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.51□□□□□ -0.57
SgcbP82349 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SgcbP82349 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
SgcbP82349 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.51□□□□□ -0.57
SgcbP82349 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.51□□□□□ -0.57
SgcbP82349 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SgcbP82349 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SgcbP82349 Gm26927-201ENSMUST00000182385 965 ntBASIC11.51□□□□□ -0.57
SgcbP82349 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.51□□□□□ -0.57
SgcbP82349 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.51□□□□□ -0.57
SgcbP82349 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.51□□□□□ -0.57
SgcbP82349 Gm4768-201ENSMUST00000206199 686 ntBASIC11.51□□□□□ -0.57
SgcbP82349 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC11.51□□□□□ -0.57
SgcbP82349 Gm18515-201ENSMUST00000219755 797 ntBASIC11.51□□□□□ -0.57
SgcbP82349 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SgcbP82349 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SgcbP82349 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SgcbP82349 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SgcbP82349 Olfr293-201ENSMUST00000081474 1011 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
SgcbP82349 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.51□□□□□ -0.57
SgcbP82349 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SgcbP82349 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SgcbP82349 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SgcbP82349 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SgcbP82349 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.51□□□□□ -0.57
SgcbP82349 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SgcbP82349 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SgcbP82349 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SgcbP82349 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SgcbP82349 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.51□□□□□ -0.57
SgcbP82349 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SgcbP82349 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SgcbP82349 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SgcbP82349 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
SgcbP82349 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
SgcbP82349 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SgcbP82349 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SgcbP82349 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms