Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Crnkl1P63154 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Crnkl1P63154 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Crnkl1P63154 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Crnkl1P63154 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.78□□□□□ -0.36
Crnkl1P63154 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Crnkl1P63154 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Crnkl1P63154 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Crnkl1P63154 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.78□□□□□ -0.36
Crnkl1P63154 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Crnkl1P63154 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Crnkl1P63154 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Crnkl1P63154 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Crnkl1P63154 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Crnkl1P63154 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Crnkl1P63154 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Crnkl1P63154 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Crnkl1P63154 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Crnkl1P63154 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Crnkl1P63154 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Crnkl1P63154 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Crnkl1P63154 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Crnkl1P63154 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Crnkl1P63154 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Crnkl1P63154 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Crnkl1P63154 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Crnkl1P63154 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Crnkl1P63154 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Crnkl1P63154 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.77□□□□□ -0.36
Crnkl1P63154 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Crnkl1P63154 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Crnkl1P63154 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Crnkl1P63154 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Crnkl1P63154 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Crnkl1P63154 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Crnkl1P63154 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
Crnkl1P63154 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Crnkl1P63154 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Crnkl1P63154 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Crnkl1P63154 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Crnkl1P63154 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.77□□□□□ -0.37
Crnkl1P63154 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Crnkl1P63154 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Crnkl1P63154 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Crnkl1P63154 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Crnkl1P63154 Gm12151-201ENSMUST00000121374 290 ntBASIC12.77□□□□□ -0.37
Crnkl1P63154 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.77□□□□□ -0.37
Crnkl1P63154 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.77□□□□□ -0.37
Crnkl1P63154 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Crnkl1P63154 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Crnkl1P63154 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.77□□□□□ -0.37
Crnkl1P63154 Gm37714-201ENSMUST00000194742 342 ntBASIC12.77□□□□□ -0.37
Crnkl1P63154 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.77□□□□□ -0.37
Crnkl1P63154 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Crnkl1P63154 Gm9229-201ENSMUST00000222777 126 ntBASIC12.77□□□□□ -0.37
Crnkl1P63154 Gm9063-201ENSMUST00000223299 582 ntBASIC12.77□□□□□ -0.37
Crnkl1P63154 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.77□□□□□ -0.37
Crnkl1P63154 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Crnkl1P63154 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Crnkl1P63154 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Crnkl1P63154 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Crnkl1P63154 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Crnkl1P63154 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Crnkl1P63154 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Crnkl1P63154 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Crnkl1P63154 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
Crnkl1P63154 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Crnkl1P63154 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Crnkl1P63154 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Crnkl1P63154 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.77□□□□□ -0.37
Crnkl1P63154 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.77□□□□□ -0.37
Crnkl1P63154 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Crnkl1P63154 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Crnkl1P63154 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Crnkl1P63154 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Crnkl1P63154 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Crnkl1P63154 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.76□□□□□ -0.37
Crnkl1P63154 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Crnkl1P63154 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Crnkl1P63154 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Crnkl1P63154 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Crnkl1P63154 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Crnkl1P63154 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Crnkl1P63154 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Crnkl1P63154 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.76□□□□□ -0.37
Crnkl1P63154 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Crnkl1P63154 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Crnkl1P63154 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Crnkl1P63154 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Crnkl1P63154 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Crnkl1P63154 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Crnkl1P63154 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Crnkl1P63154 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.76□□□□□ -0.37
Crnkl1P63154 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Crnkl1P63154 Gm3436-201ENSMUST00000179930 840 ntBASIC12.76□□□□□ -0.37
Crnkl1P63154 Mir7684-201ENSMUST00000183858 60 ntBASIC12.76□□□□□ -0.37
Crnkl1P63154 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Crnkl1P63154 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Crnkl1P63154 Mir497b-201ENSMUST00000093601 125 ntBASIC12.76□□□□□ -0.37
Crnkl1P63154 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms