Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ctdsp1P58466 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ctdsp1P58466 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Ctdsp1P58466 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.03□□□□□ -0.8
Ctdsp1P58466 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Ctdsp1P58466 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ctdsp1P58466 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ctdsp1P58466 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC10.03□□□□□ -0.8
Ctdsp1P58466 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ctdsp1P58466 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ctdsp1P58466 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.03□□□□□ -0.8
Ctdsp1P58466 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Ctdsp1P58466 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC10.02□□□□□ -0.8
Ctdsp1P58466 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Ctdsp1P58466 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Ctdsp1P58466 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Ctdsp1P58466 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.02□□□□□ -0.8
Ctdsp1P58466 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Ctdsp1P58466 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Ctdsp1P58466 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC10.02□□□□□ -0.8
Ctdsp1P58466 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Ctdsp1P58466 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Ctdsp1P58466 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ctdsp1P58466 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC10.02□□□□□ -0.81
Ctdsp1P58466 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ctdsp1P58466 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Ctdsp1P58466 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Ctdsp1P58466 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.02□□□□□ -0.81
Ctdsp1P58466 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Ctdsp1P58466 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Ctdsp1P58466 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Ctdsp1P58466 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ctdsp1P58466 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ctdsp1P58466 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC10.02□□□□□ -0.81
Ctdsp1P58466 Gm23634-201ENSMUST00000175071 91 ntBASIC10.02□□□□□ -0.81
Ctdsp1P58466 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Ctdsp1P58466 Gm42599-201ENSMUST00000201308 469 ntBASIC10.02□□□□□ -0.81
Ctdsp1P58466 AC126408.1-201ENSMUST00000225184 523 ntBASIC10.02□□□□□ -0.81
Ctdsp1P58466 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ctdsp1P58466 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ctdsp1P58466 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ctdsp1P58466 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ctdsp1P58466 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Ctdsp1P58466 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC10.02□□□□□ -0.81
Ctdsp1P58466 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Ctdsp1P58466 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.02□□□□□ -0.81
Ctdsp1P58466 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ctdsp1P58466 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Ctdsp1P58466 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ctdsp1P58466 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.02□□□□□ -0.81
Ctdsp1P58466 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.02□□□□□ -0.81
Ctdsp1P58466 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ctdsp1P58466 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ctdsp1P58466 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Ctdsp1P58466 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ctdsp1P58466 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Ctdsp1P58466 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Ctdsp1P58466 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ctdsp1P58466 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ctdsp1P58466 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC10.01□□□□□ -0.81
Ctdsp1P58466 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Ctdsp1P58466 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ctdsp1P58466 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Ctdsp1P58466 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ctdsp1P58466 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ctdsp1P58466 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ctdsp1P58466 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ctdsp1P58466 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Ctdsp1P58466 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ctdsp1P58466 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ctdsp1P58466 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Ctdsp1P58466 Cog3-203ENSMUST00000227473 4197 ntBASIC10.01□□□□□ -0.81
Ctdsp1P58466 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ctdsp1P58466 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Ctdsp1P58466 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Ctdsp1P58466 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC10.01□□□□□ -0.81
Ctdsp1P58466 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC10.01□□□□□ -0.81
Ctdsp1P58466 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Ctdsp1P58466 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Ctdsp1P58466 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC10.01□□□□□ -0.81
Ctdsp1P58466 Gm27301-201ENSMUST00000184012 127 ntBASIC10.01□□□□□ -0.81
Ctdsp1P58466 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ctdsp1P58466 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Ctdsp1P58466 AC154621.1-201ENSMUST00000226155 1119 ntBASIC10.01□□□□□ -0.81
Ctdsp1P58466 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Ctdsp1P58466 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Ctdsp1P58466 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ctdsp1P58466 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ctdsp1P58466 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ctdsp1P58466 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ctdsp1P58466 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ctdsp1P58466 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ctdsp1P58466 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ctdsp1P58466 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ctdsp1P58466 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ctdsp1P58466 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.01□□□□□ -0.81
Ctdsp1P58466 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Ctdsp1P58466 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Ctdsp1P58466 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.01□□□□□ -0.81
Ctdsp1P58466 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms