Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lim2P56563 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.91□□□□□ -0.34
Lim2P56563 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Lim2P56563 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lim2P56563 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lim2P56563 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.91□□□□□ -0.34
Lim2P56563 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lim2P56563 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lim2P56563 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lim2P56563 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lim2P56563 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lim2P56563 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lim2P56563 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.9□□□□□ -0.34
Lim2P56563 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lim2P56563 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lim2P56563 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.9□□□□□ -0.34
Lim2P56563 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lim2P56563 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lim2P56563 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lim2P56563 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lim2P56563 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lim2P56563 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Lim2P56563 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.9□□□□□ -0.34
Lim2P56563 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.9□□□□□ -0.34
Lim2P56563 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lim2P56563 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lim2P56563 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lim2P56563 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.9□□□□□ -0.34
Lim2P56563 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lim2P56563 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lim2P56563 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lim2P56563 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Lim2P56563 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Lim2P56563 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.9□□□□□ -0.34
Lim2P56563 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Lim2P56563 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Lim2P56563 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Lim2P56563 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Lim2P56563 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lim2P56563 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lim2P56563 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lim2P56563 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.89□□□□□ -0.35
Lim2P56563 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.89□□□□□ -0.35
Lim2P56563 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lim2P56563 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lim2P56563 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.89□□□□□ -0.35
Lim2P56563 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lim2P56563 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lim2P56563 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lim2P56563 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lim2P56563 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lim2P56563 Gm12957-201ENSMUST00000117835 377 ntBASIC12.89□□□□□ -0.35
Lim2P56563 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lim2P56563 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.89□□□□□ -0.35
Lim2P56563 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lim2P56563 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lim2P56563 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.89□□□□□ -0.35
Lim2P56563 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lim2P56563 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.89□□□□□ -0.35
Lim2P56563 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lim2P56563 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lim2P56563 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lim2P56563 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lim2P56563 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lim2P56563 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.89□□□□□ -0.35
Lim2P56563 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Lim2P56563 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.89□□□□□ -0.35
Lim2P56563 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lim2P56563 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Lim2P56563 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lim2P56563 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lim2P56563 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lim2P56563 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lim2P56563 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Lim2P56563 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lim2P56563 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Lim2P56563 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Lim2P56563 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lim2P56563 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.88□□□□□ -0.35
Lim2P56563 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lim2P56563 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lim2P56563 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lim2P56563 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Lim2P56563 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Lim2P56563 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.88□□□□□ -0.35
Lim2P56563 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lim2P56563 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lim2P56563 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lim2P56563 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Lim2P56563 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lim2P56563 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Lim2P56563 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lim2P56563 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lim2P56563 Mir686-201ENSMUST00000102174 109 ntBASIC12.88□□□□□ -0.35
Lim2P56563 Gm12742-201ENSMUST00000117326 410 ntBASIC12.88□□□□□ -0.35
Lim2P56563 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.88□□□□□ -0.35
Lim2P56563 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lim2P56563 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Lim2P56563 Gm37424-201ENSMUST00000191727 561 ntBASIC12.88□□□□□ -0.35
Lim2P56563 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms