Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SftpbP50405 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SftpbP50405 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
SftpbP50405 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SftpbP50405 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SftpbP50405 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
SftpbP50405 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
SftpbP50405 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SftpbP50405 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SftpbP50405 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
SftpbP50405 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SftpbP50405 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SftpbP50405 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SftpbP50405 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SftpbP50405 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SftpbP50405 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.19□□□□□ -0.3
SftpbP50405 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.19□□□□□ -0.3
SftpbP50405 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SftpbP50405 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SftpbP50405 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SftpbP50405 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SftpbP50405 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SftpbP50405 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SftpbP50405 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SftpbP50405 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SftpbP50405 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SftpbP50405 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SftpbP50405 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SftpbP50405 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SftpbP50405 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.19□□□□□ -0.3
SftpbP50405 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SftpbP50405 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.19□□□□□ -0.3
SftpbP50405 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SftpbP50405 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SftpbP50405 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SftpbP50405 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SftpbP50405 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SftpbP50405 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.18□□□□□ -0.3
SftpbP50405 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SftpbP50405 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.18□□□□□ -0.3
SftpbP50405 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.18□□□□□ -0.3
SftpbP50405 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SftpbP50405 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SftpbP50405 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SftpbP50405 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SftpbP50405 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SftpbP50405 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SftpbP50405 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SftpbP50405 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SftpbP50405 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SftpbP50405 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SftpbP50405 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SftpbP50405 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SftpbP50405 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SftpbP50405 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SftpbP50405 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SftpbP50405 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SftpbP50405 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.18□□□□□ -0.3
SftpbP50405 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SftpbP50405 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.18□□□□□ -0.3
SftpbP50405 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SftpbP50405 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SftpbP50405 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SftpbP50405 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.18□□□□□ -0.3
SftpbP50405 Gm18307-201ENSMUST00000206864 949 ntBASIC13.18□□□□□ -0.3
SftpbP50405 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
SftpbP50405 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SftpbP50405 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SftpbP50405 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SftpbP50405 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SftpbP50405 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SftpbP50405 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SftpbP50405 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SftpbP50405 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SftpbP50405 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SftpbP50405 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SftpbP50405 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SftpbP50405 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.17□□□□□ -0.3
SftpbP50405 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SftpbP50405 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SftpbP50405 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SftpbP50405 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SftpbP50405 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.17□□□□□ -0.3
SftpbP50405 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.17□□□□□ -0.3
SftpbP50405 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SftpbP50405 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
SftpbP50405 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SftpbP50405 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SftpbP50405 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SftpbP50405 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.17□□□□□ -0.3
SftpbP50405 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SftpbP50405 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.17□□□□□ -0.3
SftpbP50405 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SftpbP50405 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SftpbP50405 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SftpbP50405 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SftpbP50405 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SftpbP50405 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SftpbP50405 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SftpbP50405 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms