Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
HttP42859 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
HttP42859 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HttP42859 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HttP42859 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.31□□□□□ -0.28
HttP42859 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HttP42859 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
HttP42859 Gm22594-201ENSMUST00000104251 130 ntBASIC13.31□□□□□ -0.28
HttP42859 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HttP42859 Gm8731-201ENSMUST00000118088 412 ntBASIC13.31□□□□□ -0.28
HttP42859 Gm24398-201ENSMUST00000157870 109 ntBASIC13.31□□□□□ -0.28
HttP42859 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HttP42859 Gm9135-201ENSMUST00000182963 990 ntBASIC13.31□□□□□ -0.28
HttP42859 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC13.31□□□□□ -0.28
HttP42859 Gm45592-201ENSMUST00000209605 1043 ntBASIC13.31□□□□□ -0.28
HttP42859 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HttP42859 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
HttP42859 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.31□□□□□ -0.28
HttP42859 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.31□□□□□ -0.28
HttP42859 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
HttP42859 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
HttP42859 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HttP42859 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
HttP42859 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HttP42859 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HttP42859 Gm25053-201ENSMUST00000103982 133 ntBASIC13.3□□□□□ -0.28
HttP42859 Gm25922-201ENSMUST00000104281 130 ntBASIC13.3□□□□□ -0.28
HttP42859 Gm24679-201ENSMUST00000158762 111 ntBASIC13.3□□□□□ -0.28
HttP42859 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.3□□□□□ -0.28
HttP42859 Gm25053-202ENSMUST00000199731 132 ntBASIC13.3□□□□□ -0.28
HttP42859 AC122346.3-201ENSMUST00000223983 306 ntBASIC13.3□□□□□ -0.28
HttP42859 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HttP42859 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
HttP42859 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HttP42859 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HttP42859 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
HttP42859 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.3□□□□□ -0.28
HttP42859 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HttP42859 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HttP42859 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HttP42859 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HttP42859 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.3□□□□□ -0.28
HttP42859 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HttP42859 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HttP42859 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HttP42859 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HttP42859 Gm14193-201ENSMUST00000105067 153 ntBASIC13.3□□□□□ -0.28
HttP42859 Gm13286-201ENSMUST00000117750 537 ntBASIC13.3□□□□□ -0.28
HttP42859 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.3□□□□□ -0.28
HttP42859 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HttP42859 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
HttP42859 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC13.3□□□□□ -0.28
HttP42859 Olfr692-202ENSMUST00000217827 1126 ntBASIC13.3□□□□□ -0.28
HttP42859 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
HttP42859 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HttP42859 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HttP42859 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HttP42859 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HttP42859 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HttP42859 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HttP42859 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.3□□□□□ -0.28
HttP42859 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HttP42859 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC13.3□□□□□ -0.28
HttP42859 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC13.3□□□□□ -0.28
HttP42859 Gm42629-201ENSMUST00000199063 1102 ntBASIC13.3□□□□□ -0.28
HttP42859 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
HttP42859 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HttP42859 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HttP42859 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HttP42859 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HttP42859 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HttP42859 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
HttP42859 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
HttP42859 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HttP42859 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HttP42859 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HttP42859 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HttP42859 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.29□□□□□ -0.28
HttP42859 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HttP42859 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HttP42859 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HttP42859 Gm9661-201ENSMUST00000221611 1122 ntBASIC13.29□□□□□ -0.28
HttP42859 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.29□□□□□ -0.28
HttP42859 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.29□□□□□ -0.28
HttP42859 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
HttP42859 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.29□□□□□ -0.28
HttP42859 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HttP42859 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
HttP42859 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
HttP42859 Gm5870-201ENSMUST00000196461 282 ntBASIC13.29□□□□□ -0.28
HttP42859 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC13.29□□□□□ -0.28
HttP42859 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HttP42859 Mir326-201ENSMUST00000083637 95 ntBASIC13.29□□□□□ -0.28
HttP42859 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HttP42859 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.29□□□□□ -0.28
HttP42859 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HttP42859 Sybu-209ENSMUST00000228639 4113 ntBASIC13.29□□□□□ -0.28
HttP42859 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HttP42859 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
HttP42859 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms