Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Hoxc11P31313 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc11P31313 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc11P31313 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Hoxc11P31313 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc11P31313 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc11P31313 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc11P31313 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Hoxc11P31313 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.53□□□□□ -0.4
Hoxc11P31313 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Hoxc11P31313 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.53□□□□□ -0.4
Hoxc11P31313 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc11P31313 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxc11P31313 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxc11P31313 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxc11P31313 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxc11P31313 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxc11P31313 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.52□□□□□ -0.4
Hoxc11P31313 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.52□□□□□ -0.4
Hoxc11P31313 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxc11P31313 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxc11P31313 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxc11P31313 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxc11P31313 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxc11P31313 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Hoxc11P31313 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Hoxc11P31313 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.52□□□□□ -0.4
Hoxc11P31313 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc11P31313 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc11P31313 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc11P31313 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc11P31313 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Hoxc11P31313 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.52□□□□□ -0.41
Hoxc11P31313 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc11P31313 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc11P31313 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.52□□□□□ -0.41
Hoxc11P31313 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.52□□□□□ -0.41
Hoxc11P31313 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.52□□□□□ -0.41
Hoxc11P31313 Gm25261-201ENSMUST00000157416 134 ntBASIC12.52□□□□□ -0.41
Hoxc11P31313 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc11P31313 Gm27501-201ENSMUST00000183599 107 ntBASIC12.52□□□□□ -0.41
Hoxc11P31313 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.52□□□□□ -0.41
Hoxc11P31313 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc11P31313 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Hoxc11P31313 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc11P31313 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.52□□□□□ -0.41
Hoxc11P31313 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc11P31313 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
Hoxc11P31313 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.52□□□□□ -0.41
Hoxc11P31313 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc11P31313 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc11P31313 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc11P31313 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc11P31313 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.41
Hoxc11P31313 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc11P31313 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc11P31313 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc11P31313 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc11P31313 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc11P31313 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Hoxc11P31313 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc11P31313 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc11P31313 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc11P31313 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.51□□□□□ -0.41
Hoxc11P31313 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc11P31313 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc11P31313 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc11P31313 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc11P31313 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.51□□□□□ -0.41
Hoxc11P31313 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc11P31313 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc11P31313 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc11P31313 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc11P31313 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc11P31313 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.51□□□□□ -0.41
Hoxc11P31313 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc11P31313 Gm14723-201ENSMUST00000118686 215 ntBASIC12.51□□□□□ -0.41
Hoxc11P31313 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc11P31313 Gm16479-201ENSMUST00000121706 932 ntBASIC12.51□□□□□ -0.41
Hoxc11P31313 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc11P31313 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.51□□□□□ -0.41
Hoxc11P31313 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.51□□□□□ -0.41
Hoxc11P31313 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.51□□□□□ -0.41
Hoxc11P31313 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc11P31313 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc11P31313 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc11P31313 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc11P31313 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc11P31313 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc11P31313 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc11P31313 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc11P31313 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc11P31313 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc11P31313 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc11P31313 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc11P31313 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc11P31313 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc11P31313 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc11P31313 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Hoxc11P31313 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms