Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl6P27784 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl6P27784 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl6P27784 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl6P27784 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl6P27784 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.06□□□□□ -0.8
Ccl6P27784 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl6P27784 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl6P27784 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl6P27784 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC10.06□□□□□ -0.8
Ccl6P27784 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl6P27784 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl6P27784 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl6P27784 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Ccl6P27784 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Ccl6P27784 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl6P27784 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl6P27784 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl6P27784 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl6P27784 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl6P27784 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Ccl6P27784 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl6P27784 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Ccl6P27784 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Ccl6P27784 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
Ccl6P27784 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl6P27784 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC10.05□□□□□ -0.8
Ccl6P27784 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl6P27784 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl6P27784 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC10.05□□□□□ -0.8
Ccl6P27784 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl6P27784 Gm12960-201ENSMUST00000120017 1066 ntBASIC10.05□□□□□ -0.8
Ccl6P27784 Gm12490-201ENSMUST00000120255 560 ntBASIC10.05□□□□□ -0.8
Ccl6P27784 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC10.05□□□□□ -0.8
Ccl6P27784 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC10.05□□□□□ -0.8
Ccl6P27784 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC10.05□□□□□ -0.8
Ccl6P27784 Gm44064-201ENSMUST00000204964 1087 ntBASIC10.05□□□□□ -0.8
Ccl6P27784 Gm8463-201ENSMUST00000208573 613 ntBASIC10.05□□□□□ -0.8
Ccl6P27784 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC10.05□□□□□ -0.8
Ccl6P27784 AC173210.1-201ENSMUST00000222341 1131 ntBASIC10.05□□□□□ -0.8
Ccl6P27784 AC125117.1-201ENSMUST00000228121 468 ntBASIC10.05□□□□□ -0.8
Ccl6P27784 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl6P27784 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl6P27784 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl6P27784 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl6P27784 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl6P27784 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl6P27784 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl6P27784 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl6P27784 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl6P27784 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl6P27784 Gm9816-201ENSMUST00000122292 1414 ntBASIC10.05□□□□□ -0.8
Ccl6P27784 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl6P27784 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl6P27784 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC10.05□□□□□ -0.8
Ccl6P27784 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl6P27784 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl6P27784 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl6P27784 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl6P27784 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Ccl6P27784 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl6P27784 Gm5385-201ENSMUST00000118988 1559 ntBASIC10.05□□□□□ -0.8
Ccl6P27784 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC10.05□□□□□ -0.8
Ccl6P27784 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Ccl6P27784 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Ccl6P27784 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
Ccl6P27784 AC151895.1-201ENSMUST00000219025 1742 ntBASIC10.04□□□□□ -0.8
Ccl6P27784 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl6P27784 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC10.04□□□□□ -0.8
Ccl6P27784 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl6P27784 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Ccl6P27784 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl6P27784 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl6P27784 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl6P27784 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Ccl6P27784 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC10.04□□□□□ -0.8
Ccl6P27784 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl6P27784 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl6P27784 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl6P27784 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.04□□□□□ -0.8
Ccl6P27784 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl6P27784 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl6P27784 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC10.04□□□□□ -0.8
Ccl6P27784 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl6P27784 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl6P27784 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl6P27784 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl6P27784 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
Ccl6P27784 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
Ccl6P27784 Gm8798-201ENSMUST00000211877 1661 ntBASIC10.04□□□□□ -0.8
Ccl6P27784 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl6P27784 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl6P27784 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC10.04□□□□□ -0.8
Ccl6P27784 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC10.04□□□□□ -0.8
Ccl6P27784 Gm5687-201ENSMUST00000118252 640 ntBASIC10.04□□□□□ -0.8
Ccl6P27784 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl6P27784 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl6P27784 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC10.04□□□□□ -0.8
Ccl6P27784 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC10.04□□□□□ -0.8
Ccl6P27784 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms