Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1aP25118 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Tnfrsf1aP25118 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1aP25118 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1aP25118 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1aP25118 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1aP25118 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Tnfrsf1aP25118 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1aP25118 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC10.82□□□□□ -0.68
Tnfrsf1aP25118 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1aP25118 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Tnfrsf1aP25118 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1aP25118 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC10.82□□□□□ -0.68
Tnfrsf1aP25118 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Tnfrsf1aP25118 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1aP25118 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1aP25118 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1aP25118 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1aP25118 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1aP25118 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1aP25118 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1aP25118 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1aP25118 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1aP25118 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1aP25118 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
Tnfrsf1aP25118 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Tnfrsf1aP25118 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Tnfrsf1aP25118 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC10.81□□□□□ -0.68
Tnfrsf1aP25118 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC10.81□□□□□ -0.68
Tnfrsf1aP25118 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC10.81□□□□□ -0.68
Tnfrsf1aP25118 Gm6152-201ENSMUST00000151704 340 ntBASIC10.81□□□□□ -0.68
Tnfrsf1aP25118 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1aP25118 Gm5276-201ENSMUST00000196683 1047 ntBASIC10.81□□□□□ -0.68
Tnfrsf1aP25118 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1aP25118 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC10.81□□□□□ -0.68
Tnfrsf1aP25118 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC10.81□□□□□ -0.68
Tnfrsf1aP25118 AC132467.2-202ENSMUST00000227726 559 ntBASIC10.81□□□□□ -0.68
Tnfrsf1aP25118 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1aP25118 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Tnfrsf1aP25118 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1aP25118 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1aP25118 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Tnfrsf1aP25118 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
Tnfrsf1aP25118 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1aP25118 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC10.81□□□□□ -0.68
Tnfrsf1aP25118 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Tnfrsf1aP25118 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1aP25118 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1aP25118 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC10.81□□□□□ -0.68
Tnfrsf1aP25118 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1aP25118 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Tnfrsf1aP25118 Ankra2-208ENSMUST00000226100 1476 ntBASIC10.81□□□□□ -0.68
Tnfrsf1aP25118 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1aP25118 Gm42863-201ENSMUST00000197875 2958 ntBASIC10.8□□□□□ -0.68
Tnfrsf1aP25118 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1aP25118 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1aP25118 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1aP25118 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Tnfrsf1aP25118 Gm15544-201ENSMUST00000118776 1531 ntBASIC10.8□□□□□ -0.68
Tnfrsf1aP25118 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1aP25118 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1aP25118 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1aP25118 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1aP25118 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1aP25118 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1aP25118 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC10.8□□□□□ -0.68
Tnfrsf1aP25118 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1aP25118 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC10.8□□□□□ -0.68
Tnfrsf1aP25118 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC10.8□□□□□ -0.68
Tnfrsf1aP25118 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC10.8□□□□□ -0.68
Tnfrsf1aP25118 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Tnfrsf1aP25118 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC10.8□□□□□ -0.68
Tnfrsf1aP25118 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC10.8□□□□□ -0.68
Tnfrsf1aP25118 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Tnfrsf1aP25118 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1aP25118 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC10.8□□□□□ -0.68
Tnfrsf1aP25118 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1aP25118 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1aP25118 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.8□□□□□ -0.68
Tnfrsf1aP25118 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC10.8□□□□□ -0.68
Tnfrsf1aP25118 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC10.8□□□□□ -0.68
Tnfrsf1aP25118 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1aP25118 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC10.8□□□□□ -0.68
Tnfrsf1aP25118 AC164107.1-201ENSMUST00000227730 2161 ntBASIC10.8□□□□□ -0.68
Tnfrsf1aP25118 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1aP25118 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1aP25118 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1aP25118 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1aP25118 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC10.8□□□□□ -0.68
Tnfrsf1aP25118 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC10.8□□□□□ -0.68
Tnfrsf1aP25118 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Tnfrsf1aP25118 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Tnfrsf1aP25118 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Tnfrsf1aP25118 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf1aP25118 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf1aP25118 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf1aP25118 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf1aP25118 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Tnfrsf1aP25118 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Tnfrsf1aP25118 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms