Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccl3P10855 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ccl3P10855 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Ccl3P10855 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Ccl3P10855 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Ccl3P10855 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl3P10855 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl3P10855 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl3P10855 Sorbs3-204ENSMUST00000227929 2460 ntBASIC11.35□□□□□ -0.59
Ccl3P10855 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl3P10855 AC167013.2-201ENSMUST00000228520 2684 ntBASIC11.35□□□□□ -0.59
Ccl3P10855 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.35□□□□□ -0.59
Ccl3P10855 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl3P10855 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl3P10855 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl3P10855 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl3P10855 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl3P10855 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.35□□□□□ -0.59
Ccl3P10855 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl3P10855 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Ccl3P10855 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Ccl3P10855 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl3P10855 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.35□□□□□ -0.59
Ccl3P10855 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.35□□□□□ -0.59
Ccl3P10855 Gm22334-201ENSMUST00000158070 133 ntBASIC11.35□□□□□ -0.59
Ccl3P10855 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl3P10855 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC11.35□□□□□ -0.59
Ccl3P10855 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl3P10855 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.35□□□□□ -0.59
Ccl3P10855 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl3P10855 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl3P10855 Gm45433-201ENSMUST00000209386 247 ntBASIC11.35□□□□□ -0.59
Ccl3P10855 Gm8959-201ENSMUST00000213150 571 ntBASIC11.35□□□□□ -0.59
Ccl3P10855 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Ccl3P10855 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl3P10855 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl3P10855 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl3P10855 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl3P10855 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Ccl3P10855 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Ccl3P10855 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl3P10855 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl3P10855 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl3P10855 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl3P10855 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl3P10855 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl3P10855 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl3P10855 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl3P10855 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl3P10855 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.35□□□□□ -0.59
Ccl3P10855 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl3P10855 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl3P10855 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Ccl3P10855 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.35□□□□□ -0.59
Ccl3P10855 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Ccl3P10855 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl3P10855 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Ccl3P10855 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl3P10855 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC11.34□□□□□ -0.59
Ccl3P10855 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl3P10855 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl3P10855 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl3P10855 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Ccl3P10855 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Ccl3P10855 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Ccl3P10855 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Ccl3P10855 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.34□□□□□ -0.59
Ccl3P10855 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl3P10855 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl3P10855 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl3P10855 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl3P10855 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl3P10855 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.34□□□□□ -0.59
Ccl3P10855 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.34□□□□□ -0.59
Ccl3P10855 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
Ccl3P10855 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl3P10855 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Ccl3P10855 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl3P10855 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.34□□□□□ -0.59
Ccl3P10855 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.34□□□□□ -0.59
Ccl3P10855 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl3P10855 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl3P10855 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.34□□□□□ -0.59
Ccl3P10855 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl3P10855 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl3P10855 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl3P10855 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Ccl3P10855 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl3P10855 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl3P10855 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl3P10855 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ccl3P10855 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl3P10855 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl3P10855 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl3P10855 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl3P10855 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl3P10855 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl3P10855 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ccl3P10855 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.33□□□□□ -0.6
Ccl3P10855 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms