Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igh-VJ558P01758 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igh-VJ558P01758 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igh-VJ558P01758 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Igh-VJ558P01758 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.63
Igh-VJ558P01758 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Igh-VJ558P01758 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Igh-VJ558P01758 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Igh-VJ558P01758 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.15□□□□□ -0.63
Igh-VJ558P01758 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Igh-VJ558P01758 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igh-VJ558P01758 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Igh-VJ558P01758 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igh-VJ558P01758 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Igh-VJ558P01758 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Igh-VJ558P01758 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igh-VJ558P01758 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.14□□□□□ -0.63
Igh-VJ558P01758 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igh-VJ558P01758 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Igh-VJ558P01758 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Igh-VJ558P01758 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igh-VJ558P01758 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igh-VJ558P01758 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igh-VJ558P01758 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Igh-VJ558P01758 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Igh-VJ558P01758 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igh-VJ558P01758 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
Igh-VJ558P01758 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igh-VJ558P01758 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.14□□□□□ -0.63
Igh-VJ558P01758 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igh-VJ558P01758 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.14□□□□□ -0.63
Igh-VJ558P01758 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.14□□□□□ -0.63
Igh-VJ558P01758 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igh-VJ558P01758 Gm24644-201ENSMUST00000157114 139 ntBASIC11.14□□□□□ -0.63
Igh-VJ558P01758 Gm26185-201ENSMUST00000157692 266 ntBASIC11.14□□□□□ -0.63
Igh-VJ558P01758 Gm4271-201ENSMUST00000174444 973 ntBASIC11.14□□□□□ -0.63
Igh-VJ558P01758 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC11.14□□□□□ -0.63
Igh-VJ558P01758 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC11.14□□□□□ -0.63
Igh-VJ558P01758 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igh-VJ558P01758 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igh-VJ558P01758 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Igh-VJ558P01758 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Igh-VJ558P01758 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Igh-VJ558P01758 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igh-VJ558P01758 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igh-VJ558P01758 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Igh-VJ558P01758 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igh-VJ558P01758 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igh-VJ558P01758 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igh-VJ558P01758 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igh-VJ558P01758 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igh-VJ558P01758 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igh-VJ558P01758 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.14□□□□□ -0.63
Igh-VJ558P01758 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
Igh-VJ558P01758 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Igh-VJ558P01758 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.14□□□□□ -0.63
Igh-VJ558P01758 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Igh-VJ558P01758 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Gm15163-201ENSMUST00000120749 1302 ntBASIC11.13□□□□□ -0.63
Igh-VJ558P01758 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Gm7029-201ENSMUST00000173226 450 ntBASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Gm23363-201ENSMUST00000175024 79 ntBASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.13□□□□□ -0.63
Igh-VJ558P01758 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Gm6091-201ENSMUST00000098307 165 ntBASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igh-VJ558P01758 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Igh-VJ558P01758 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms