Protein–RNA interactions for Protein: P01643

Ig kappa chain V-V region MOPC 173, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01643 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
P01643 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
P01643 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
P01643 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
P01643 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
P01643 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P01643 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
P01643 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
P01643 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
P01643 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
P01643 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P01643 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P01643 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
P01643 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
P01643 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC10.24□□□□□ -0.77
P01643 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
P01643 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
P01643 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P01643 Gm11222-201ENSMUST00000119005 738 ntBASIC10.24□□□□□ -0.77
P01643 Gm11964-201ENSMUST00000120982 444 ntBASIC10.24□□□□□ -0.77
P01643 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC10.24□□□□□ -0.77
P01643 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
P01643 Gm26083-201ENSMUST00000157904 193 ntBASIC10.24□□□□□ -0.77
P01643 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
P01643 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
P01643 Gm4857-201ENSMUST00000192718 785 ntBASIC10.24□□□□□ -0.77
P01643 Ighv1-62-201ENSMUST00000193406 350 ntBASIC10.24□□□□□ -0.77
P01643 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P01643 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
P01643 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
P01643 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
P01643 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P01643 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
P01643 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P01643 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
P01643 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
P01643 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P01643 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
P01643 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P01643 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC10.24□□□□□ -0.77
P01643 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC10.24□□□□□ -0.77
P01643 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
P01643 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
P01643 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC10.24□□□□□ -0.77
P01643 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P01643 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P01643 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
P01643 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P01643 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P01643 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
P01643 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
P01643 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
P01643 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P01643 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
P01643 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P01643 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
P01643 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P01643 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC10.23□□□□□ -0.77
P01643 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
P01643 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
P01643 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P01643 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
P01643 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
P01643 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P01643 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
P01643 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P01643 Gm20482-202ENSMUST00000174729 825 ntBASIC10.23□□□□□ -0.77
P01643 Gm8176-201ENSMUST00000191297 1099 ntBASIC10.23□□□□□ -0.77
P01643 Gm38000-201ENSMUST00000192390 1215 ntBASIC10.23□□□□□ -0.77
P01643 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
P01643 Gm19963-201ENSMUST00000208413 1255 ntBASIC10.23□□□□□ -0.77
P01643 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC10.23□□□□□ -0.77
P01643 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
P01643 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P01643 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
P01643 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P01643 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P01643 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC10.23□□□□□ -0.77
P01643 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
P01643 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
P01643 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P01643 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P01643 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
P01643 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P01643 Gm37324-201ENSMUST00000194500 4504 ntBASIC10.23□□□□□ -0.77
P01643 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
P01643 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
P01643 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
P01643 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
P01643 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
P01643 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC10.23□□□□□ -0.77
P01643 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P01643 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
P01643 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
P01643 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
P01643 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
P01643 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P01643 Gm6992-201ENSMUST00000217973 1607 ntBASIC10.22□□□□□ -0.77
P01643 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
P01643 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms