Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.89□□□□□ -0.51
Alx3O70137 CT025525.2-201ENSMUST00000227743 423 ntBASIC11.89□□□□□ -0.51
Alx3O70137 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Alx3O70137 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Alx3O70137 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Alx3O70137 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Alx3O70137 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Alx3O70137 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Alx3O70137 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Alx3O70137 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Alx3O70137 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Alx3O70137 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Alx3O70137 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Alx3O70137 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Alx3O70137 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Alx3O70137 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.89□□□□□ -0.51
Alx3O70137 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Alx3O70137 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Alx3O70137 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Alx3O70137 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Alx3O70137 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Alx3O70137 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Alx3O70137 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.88□□□□□ -0.51
Alx3O70137 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Alx3O70137 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.88□□□□□ -0.51
Alx3O70137 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Alx3O70137 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Alx3O70137 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.88□□□□□ -0.51
Alx3O70137 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Alx3O70137 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Alx3O70137 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Alx3O70137 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Alx3O70137 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Alx3O70137 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Alx3O70137 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Alx3O70137 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Alx3O70137 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.88□□□□□ -0.51
Alx3O70137 Gm15321-201ENSMUST00000121290 288 ntBASIC11.88□□□□□ -0.51
Alx3O70137 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Alx3O70137 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.88□□□□□ -0.51
Alx3O70137 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Alx3O70137 Mir7023-201ENSMUST00000185093 64 ntBASIC11.88□□□□□ -0.51
Alx3O70137 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC11.88□□□□□ -0.51
Alx3O70137 CT025642.1-201ENSMUST00000224734 1219 ntBASIC11.88□□□□□ -0.51
Alx3O70137 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Alx3O70137 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Alx3O70137 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Alx3O70137 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Alx3O70137 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Alx3O70137 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.88□□□□□ -0.51
Alx3O70137 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Alx3O70137 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Alx3O70137 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Alx3O70137 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Alx3O70137 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Alx3O70137 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Alx3O70137 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Alx3O70137 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Alx3O70137 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Alx3O70137 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Alx3O70137 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Alx3O70137 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Alx3O70137 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.87□□□□□ -0.51
Alx3O70137 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Alx3O70137 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Alx3O70137 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Alx3O70137 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.87□□□□□ -0.51
Alx3O70137 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Alx3O70137 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Alx3O70137 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.87□□□□□ -0.51
Alx3O70137 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.87□□□□□ -0.51
Alx3O70137 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Alx3O70137 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.87□□□□□ -0.51
Alx3O70137 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Alx3O70137 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Alx3O70137 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Alx3O70137 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Alx3O70137 Gm43980-201ENSMUST00000204899 1612 ntBASIC11.87□□□□□ -0.51
Alx3O70137 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Alx3O70137 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Alx3O70137 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Alx3O70137 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Alx3O70137 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.87□□□□□ -0.51
Alx3O70137 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Alx3O70137 Rbm48-202ENSMUST00000121877 617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Alx3O70137 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Alx3O70137 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC11.87□□□□□ -0.51
Alx3O70137 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Alx3O70137 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Alx3O70137 Gm29288-201ENSMUST00000191582 901 ntBASIC11.87□□□□□ -0.51
Alx3O70137 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Alx3O70137 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.87□□□□□ -0.51
Alx3O70137 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Alx3O70137 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Alx3O70137 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Alx3O70137 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Alx3O70137 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Alx3O70137 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Alx3O70137 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Alx3O70137 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms