Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Rnf13O54965 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC11.7□□□□□ -0.54
Rnf13O54965 Gm21854-201ENSMUST00000179901 471 ntBASIC11.7□□□□□ -0.54
Rnf13O54965 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf13O54965 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.7□□□□□ -0.54
Rnf13O54965 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.7□□□□□ -0.54
Rnf13O54965 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf13O54965 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf13O54965 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf13O54965 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.7□□□□□ -0.54
Rnf13O54965 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf13O54965 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf13O54965 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.7□□□□□ -0.54
Rnf13O54965 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf13O54965 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf13O54965 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf13O54965 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Rnf13O54965 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf13O54965 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf13O54965 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf13O54965 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.7□□□□□ -0.54
Rnf13O54965 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf13O54965 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.7□□□□□ -0.54
Rnf13O54965 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf13O54965 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf13O54965 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf13O54965 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Rnf13O54965 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf13O54965 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf13O54965 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Rnf13O54965 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf13O54965 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Rnf13O54965 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf13O54965 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf13O54965 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf13O54965 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf13O54965 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf13O54965 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.69□□□□□ -0.54
Rnf13O54965 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC11.69□□□□□ -0.54
Rnf13O54965 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.69□□□□□ -0.54
Rnf13O54965 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf13O54965 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf13O54965 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Rnf13O54965 Gm27306-201ENSMUST00000183970 107 ntBASIC11.69□□□□□ -0.54
Rnf13O54965 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.69□□□□□ -0.54
Rnf13O54965 Gm9797-201ENSMUST00000052902 613 ntBASIC11.69□□□□□ -0.54
Rnf13O54965 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf13O54965 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf13O54965 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf13O54965 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf13O54965 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf13O54965 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Rnf13O54965 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.69□□□□□ -0.54
Rnf13O54965 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Rnf13O54965 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf13O54965 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf13O54965 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf13O54965 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf13O54965 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf13O54965 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.69□□□□□ -0.54
Rnf13O54965 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf13O54965 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf13O54965 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Rnf13O54965 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf13O54965 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Rnf13O54965 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf13O54965 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf13O54965 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf13O54965 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf13O54965 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.68□□□□□ -0.54
Rnf13O54965 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf13O54965 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf13O54965 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.68□□□□□ -0.54
Rnf13O54965 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf13O54965 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf13O54965 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf13O54965 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf13O54965 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf13O54965 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf13O54965 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Rnf13O54965 Mir6956-201ENSMUST00000183598 62 ntBASIC11.68□□□□□ -0.54
Rnf13O54965 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf13O54965 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf13O54965 Gm42550-201ENSMUST00000201553 960 ntBASIC11.68□□□□□ -0.54
Rnf13O54965 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf13O54965 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC11.68□□□□□ -0.54
Rnf13O54965 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.68□□□□□ -0.54
Rnf13O54965 Gm26315-201ENSMUST00000083890 321 ntBASIC11.68□□□□□ -0.54
Rnf13O54965 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf13O54965 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
Rnf13O54965 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf13O54965 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf13O54965 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf13O54965 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf13O54965 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf13O54965 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.68□□□□□ -0.54
Rnf13O54965 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Rnf13O54965 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.67□□□□□ -0.54
Rnf13O54965 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.67□□□□□ -0.54
Rnf13O54965 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms