Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ube4aE9Q735 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Ube4aE9Q735 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ube4aE9Q735 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ube4aE9Q735 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Ube4aE9Q735 Gm14028-201ENSMUST00000117434 479 ntBASIC15.44■□□□□ 0.06
Ube4aE9Q735 Gm4909-201ENSMUST00000118749 794 ntBASIC15.44■□□□□ 0.06
Ube4aE9Q735 Gm15703-201ENSMUST00000120250 880 ntBASIC15.44■□□□□ 0.06
Ube4aE9Q735 Gm13315-201ENSMUST00000120376 991 ntBASIC15.44■□□□□ 0.06
Ube4aE9Q735 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC15.44■□□□□ 0.06
Ube4aE9Q735 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ube4aE9Q735 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ube4aE9Q735 Gm9445-201ENSMUST00000207454 1285 ntBASIC15.44■□□□□ 0.06
Ube4aE9Q735 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC15.44■□□□□ 0.06
Ube4aE9Q735 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ube4aE9Q735 Gm10312-201ENSMUST00000078515 489 ntBASIC15.44■□□□□ 0.06
Ube4aE9Q735 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ube4aE9Q735 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ube4aE9Q735 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ube4aE9Q735 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ube4aE9Q735 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ube4aE9Q735 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ube4aE9Q735 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ube4aE9Q735 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ube4aE9Q735 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ube4aE9Q735 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ube4aE9Q735 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC15.43■□□□□ 0.06
Ube4aE9Q735 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Ube4aE9Q735 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ube4aE9Q735 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Ube4aE9Q735 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ube4aE9Q735 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ube4aE9Q735 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Ube4aE9Q735 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ube4aE9Q735 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.43■□□□□ 0.06
Ube4aE9Q735 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ube4aE9Q735 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC15.43■□□□□ 0.06
Ube4aE9Q735 Gm25700-201ENSMUST00000177693 110 ntBASIC15.43■□□□□ 0.06
Ube4aE9Q735 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC15.43■□□□□ 0.06
Ube4aE9Q735 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ube4aE9Q735 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC15.43■□□□□ 0.06
Ube4aE9Q735 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Ube4aE9Q735 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC15.43■□□□□ 0.06
Ube4aE9Q735 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ube4aE9Q735 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ube4aE9Q735 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
Ube4aE9Q735 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ube4aE9Q735 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ube4aE9Q735 Gm44401-201ENSMUST00000204462 2375 ntBASIC15.43■□□□□ 0.06
Ube4aE9Q735 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ube4aE9Q735 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ube4aE9Q735 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ube4aE9Q735 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ube4aE9Q735 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ube4aE9Q735 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ube4aE9Q735 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ube4aE9Q735 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ube4aE9Q735 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Ube4aE9Q735 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Ube4aE9Q735 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ube4aE9Q735 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ube4aE9Q735 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4aE9Q735 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Ube4aE9Q735 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4aE9Q735 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4aE9Q735 AC137842.1-201ENSMUST00000227896 2064 ntBASIC15.42■□□□□ 0.06
Ube4aE9Q735 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4aE9Q735 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC15.42■□□□□ 0.06
Ube4aE9Q735 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Ube4aE9Q735 Gm43908-201ENSMUST00000205074 1472 ntBASIC15.42■□□□□ 0.06
Ube4aE9Q735 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4aE9Q735 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC15.42■□□□□ 0.06
Ube4aE9Q735 Gm12314-201ENSMUST00000118104 538 ntBASIC15.42■□□□□ 0.06
Ube4aE9Q735 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4aE9Q735 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4aE9Q735 Gm8856-201ENSMUST00000185254 1144 ntBASIC15.42■□□□□ 0.06
Ube4aE9Q735 Gm28882-201ENSMUST00000185504 314 ntBASIC15.42■□□□□ 0.06
Ube4aE9Q735 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4aE9Q735 Gm18753-201ENSMUST00000201000 566 ntBASIC15.42■□□□□ 0.06
Ube4aE9Q735 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC15.42■□□□□ 0.06
Ube4aE9Q735 Gm39404-201ENSMUST00000216350 313 ntBASIC15.42■□□□□ 0.06
Ube4aE9Q735 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4aE9Q735 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4aE9Q735 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4aE9Q735 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4aE9Q735 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4aE9Q735 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4aE9Q735 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4aE9Q735 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4aE9Q735 Gm5846-201ENSMUST00000193146 1414 ntBASIC15.42■□□□□ 0.06
Ube4aE9Q735 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4aE9Q735 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4aE9Q735 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Ube4aE9Q735 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Ube4aE9Q735 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4aE9Q735 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.41■□□□□ 0.06
Ube4aE9Q735 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Ube4aE9Q735 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Ube4aE9Q735 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
Ube4aE9Q735 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms