Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn7aB1AYL1 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Scn7aB1AYL1 Zkscan3-207ENSMUST00000223831 2101 ntBASIC16.25■□□□□ 0.19
Scn7aB1AYL1 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn7aB1AYL1 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn7aB1AYL1 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC16.25■□□□□ 0.19
Scn7aB1AYL1 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn7aB1AYL1 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC16.25■□□□□ 0.19
Scn7aB1AYL1 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Scn7aB1AYL1 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn7aB1AYL1 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC16.25■□□□□ 0.19
Scn7aB1AYL1 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Scn7aB1AYL1 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn7aB1AYL1 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn7aB1AYL1 Gm4735-201ENSMUST00000138679 1302 ntBASIC16.25■□□□□ 0.19
Scn7aB1AYL1 Gm5855-201ENSMUST00000200240 1305 ntBASIC16.25■□□□□ 0.19
Scn7aB1AYL1 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn7aB1AYL1 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn7aB1AYL1 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn7aB1AYL1 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Scn7aB1AYL1 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC16.24■□□□□ 0.19
Scn7aB1AYL1 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Scn7aB1AYL1 D9Wsu149-201ENSMUST00000214169 594 ntBASIC16.24■□□□□ 0.19
Scn7aB1AYL1 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC16.24■□□□□ 0.19
Scn7aB1AYL1 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC16.24■□□□□ 0.19
Scn7aB1AYL1 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Scn7aB1AYL1 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC16.24■□□□□ 0.19
Scn7aB1AYL1 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn7aB1AYL1 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn7aB1AYL1 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Scn7aB1AYL1 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn7aB1AYL1 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC16.24■□□□□ 0.19
Scn7aB1AYL1 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Scn7aB1AYL1 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn7aB1AYL1 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn7aB1AYL1 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Scn7aB1AYL1 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn7aB1AYL1 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn7aB1AYL1 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn7aB1AYL1 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Scn7aB1AYL1 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Scn7aB1AYL1 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC16.24■□□□□ 0.19
Scn7aB1AYL1 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC16.24■□□□□ 0.19
Scn7aB1AYL1 Gm23085-201ENSMUST00000157849 293 ntBASIC16.24■□□□□ 0.19
Scn7aB1AYL1 Gm42863-201ENSMUST00000197875 2958 ntBASIC16.24■□□□□ 0.19
Scn7aB1AYL1 AC166992.1-201ENSMUST00000216356 565 ntBASIC16.24■□□□□ 0.19
Scn7aB1AYL1 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC16.24■□□□□ 0.19
Scn7aB1AYL1 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn7aB1AYL1 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn7aB1AYL1 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn7aB1AYL1 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Scn7aB1AYL1 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn7aB1AYL1 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Scn7aB1AYL1 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Scn7aB1AYL1 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC16.23■□□□□ 0.19
Scn7aB1AYL1 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC16.23■□□□□ 0.19
Scn7aB1AYL1 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Scn7aB1AYL1 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Scn7aB1AYL1 Gm18227-201ENSMUST00000211082 1468 ntBASIC16.23■□□□□ 0.19
Scn7aB1AYL1 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Scn7aB1AYL1 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Scn7aB1AYL1 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC16.23■□□□□ 0.19
Scn7aB1AYL1 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Scn7aB1AYL1 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Scn7aB1AYL1 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn7aB1AYL1 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC16.23■□□□□ 0.19
Scn7aB1AYL1 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn7aB1AYL1 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Scn7aB1AYL1 Gm16166-201ENSMUST00000118291 787 ntBASIC16.23■□□□□ 0.19
Scn7aB1AYL1 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC16.23■□□□□ 0.19
Scn7aB1AYL1 Gm5732-201ENSMUST00000182596 1007 ntBASIC16.23■□□□□ 0.19
Scn7aB1AYL1 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Scn7aB1AYL1 Ighv4-2-201ENSMUST00000192975 362 ntBASIC16.23■□□□□ 0.19
Scn7aB1AYL1 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Scn7aB1AYL1 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn7aB1AYL1 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn7aB1AYL1 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Scn7aB1AYL1 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Scn7aB1AYL1 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Scn7aB1AYL1 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn7aB1AYL1 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn7aB1AYL1 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn7aB1AYL1 Gm7049-201ENSMUST00000223520 1712 ntBASIC16.23■□□□□ 0.19
Scn7aB1AYL1 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn7aB1AYL1 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Scn7aB1AYL1 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn7aB1AYL1 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC16.22■□□□□ 0.19
Scn7aB1AYL1 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn7aB1AYL1 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Scn7aB1AYL1 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Scn7aB1AYL1 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn7aB1AYL1 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Scn7aB1AYL1 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC16.22■□□□□ 0.19
Scn7aB1AYL1 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Scn7aB1AYL1 Gm15432-201ENSMUST00000121106 195 ntBASIC16.22■□□□□ 0.19
Scn7aB1AYL1 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Scn7aB1AYL1 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC16.22■□□□□ 0.19
Scn7aB1AYL1 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC16.22■□□□□ 0.19
Scn7aB1AYL1 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC16.22■□□□□ 0.19
Scn7aB1AYL1 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms