Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav12d-1A0N8R0 AC157950.1-201ENSMUST00000217561 2168 ntBASIC10.38□□□□□ -0.75
Trav12d-1A0N8R0 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav12d-1A0N8R0 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav12d-1A0N8R0 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav12d-1A0N8R0 Gm19817-201ENSMUST00000199764 2132 ntBASIC10.37□□□□□ -0.75
Trav12d-1A0N8R0 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav12d-1A0N8R0 Gm27177-202ENSMUST00000183514 2703 ntBASIC10.37□□□□□ -0.75
Trav12d-1A0N8R0 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.37□□□□□ -0.75
Trav12d-1A0N8R0 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav12d-1A0N8R0 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav12d-1A0N8R0 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Trav12d-1A0N8R0 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav12d-1A0N8R0 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav12d-1A0N8R0 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC10.37□□□□□ -0.75
Trav12d-1A0N8R0 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC10.37□□□□□ -0.75
Trav12d-1A0N8R0 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav12d-1A0N8R0 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC10.37□□□□□ -0.75
Trav12d-1A0N8R0 Gm36970-201ENSMUST00000193688 1859 ntBASIC10.37□□□□□ -0.75
Trav12d-1A0N8R0 Gm45684-201ENSMUST00000210244 1571 ntBASIC10.37□□□□□ -0.75
Trav12d-1A0N8R0 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.37□□□□□ -0.75
Trav12d-1A0N8R0 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav12d-1A0N8R0 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav12d-1A0N8R0 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.37□□□□□ -0.75
Trav12d-1A0N8R0 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav12d-1A0N8R0 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav12d-1A0N8R0 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav12d-1A0N8R0 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Trav12d-1A0N8R0 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Trav12d-1A0N8R0 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav12d-1A0N8R0 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav12d-1A0N8R0 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav12d-1A0N8R0 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav12d-1A0N8R0 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav12d-1A0N8R0 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav12d-1A0N8R0 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav12d-1A0N8R0 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav12d-1A0N8R0 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav12d-1A0N8R0 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav12d-1A0N8R0 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.37□□□□□ -0.75
Trav12d-1A0N8R0 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Trav12d-1A0N8R0 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.37□□□□□ -0.75
Trav12d-1A0N8R0 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav12d-1A0N8R0 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC10.37□□□□□ -0.75
Trav12d-1A0N8R0 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.37□□□□□ -0.75
Trav12d-1A0N8R0 AC122840.1-201ENSMUST00000220915 3334 ntBASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Gm9630-201ENSMUST00000178304 885 ntBASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Gm27838-201ENSMUST00000184829 128 ntBASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 AC132104.2-201ENSMUST00000215011 266 ntBASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Gm18630-201ENSMUST00000222109 1397 ntBASIC10.36□□□□□ -0.75
Trav12d-1A0N8R0 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms