Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.85□□□□□ -0.35
Ccdc194A0A140LIT1 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc194A0A140LIT1 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc194A0A140LIT1 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.85□□□□□ -0.35
Ccdc194A0A140LIT1 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Ccdc194A0A140LIT1 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc194A0A140LIT1 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc194A0A140LIT1 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ccdc194A0A140LIT1 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc194A0A140LIT1 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.84□□□□□ -0.35
Ccdc194A0A140LIT1 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.84□□□□□ -0.35
Ccdc194A0A140LIT1 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Ccdc194A0A140LIT1 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc194A0A140LIT1 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Ccdc194A0A140LIT1 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc194A0A140LIT1 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc194A0A140LIT1 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc194A0A140LIT1 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Ccdc194A0A140LIT1 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
Ccdc194A0A140LIT1 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.84□□□□□ -0.35
Ccdc194A0A140LIT1 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc194A0A140LIT1 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.84□□□□□ -0.35
Ccdc194A0A140LIT1 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc194A0A140LIT1 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc194A0A140LIT1 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Ccdc194A0A140LIT1 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.84□□□□□ -0.35
Ccdc194A0A140LIT1 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.84□□□□□ -0.35
Ccdc194A0A140LIT1 Gm18624-201ENSMUST00000220966 658 ntBASIC12.84□□□□□ -0.35
Ccdc194A0A140LIT1 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.84□□□□□ -0.35
Ccdc194A0A140LIT1 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc194A0A140LIT1 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc194A0A140LIT1 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.84□□□□□ -0.35
Ccdc194A0A140LIT1 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc194A0A140LIT1 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc194A0A140LIT1 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc194A0A140LIT1 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc194A0A140LIT1 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc194A0A140LIT1 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc194A0A140LIT1 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc194A0A140LIT1 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc194A0A140LIT1 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.84□□□□□ -0.35
Ccdc194A0A140LIT1 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc194A0A140LIT1 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc194A0A140LIT1 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc194A0A140LIT1 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Ccdc194A0A140LIT1 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Ccdc194A0A140LIT1 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Ccdc194A0A140LIT1 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ccdc194A0A140LIT1 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Ccdc194A0A140LIT1 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.83□□□□□ -0.35
Ccdc194A0A140LIT1 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Ccdc194A0A140LIT1 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc194A0A140LIT1 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc194A0A140LIT1 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc194A0A140LIT1 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc194A0A140LIT1 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Ccdc194A0A140LIT1 Gm5687-201ENSMUST00000118252 640 ntBASIC12.83□□□□□ -0.36
Ccdc194A0A140LIT1 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.83□□□□□ -0.36
Ccdc194A0A140LIT1 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Ccdc194A0A140LIT1 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Ccdc194A0A140LIT1 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc194A0A140LIT1 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.83□□□□□ -0.36
Ccdc194A0A140LIT1 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc194A0A140LIT1 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.83□□□□□ -0.36
Ccdc194A0A140LIT1 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.83□□□□□ -0.36
Ccdc194A0A140LIT1 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc194A0A140LIT1 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc194A0A140LIT1 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Ccdc194A0A140LIT1 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc194A0A140LIT1 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc194A0A140LIT1 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Ccdc194A0A140LIT1 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc194A0A140LIT1 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.83□□□□□ -0.36
Ccdc194A0A140LIT1 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.83□□□□□ -0.36
Ccdc194A0A140LIT1 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc194A0A140LIT1 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc194A0A140LIT1 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc194A0A140LIT1 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc194A0A140LIT1 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Ccdc194A0A140LIT1 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Ccdc194A0A140LIT1 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc194A0A140LIT1 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc194A0A140LIT1 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc194A0A140LIT1 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Ccdc194A0A140LIT1 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.83□□□□□ -0.36
Ccdc194A0A140LIT1 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
Ccdc194A0A140LIT1 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.83□□□□□ -0.36
Ccdc194A0A140LIT1 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.83□□□□□ -0.36
Ccdc194A0A140LIT1 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.82□□□□□ -0.36
Ccdc194A0A140LIT1 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.82□□□□□ -0.36
Ccdc194A0A140LIT1 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc194A0A140LIT1 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Ccdc194A0A140LIT1 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
Ccdc194A0A140LIT1 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc194A0A140LIT1 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccdc194A0A140LIT1 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.82□□□□□ -0.36
Ccdc194A0A140LIT1 Gm14350-201ENSMUST00000116642 640 ntBASIC12.82□□□□□ -0.36
Ccdc194A0A140LIT1 Gm11978-201ENSMUST00000122315 466 ntBASIC12.82□□□□□ -0.36
Ccdc194A0A140LIT1 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Ccdc194A0A140LIT1 Gm6152-201ENSMUST00000151704 340 ntBASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms