Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb2S4R1M3 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb2S4R1M3 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb2S4R1M3 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.92□□□□□ -0.34
H2afb2S4R1M3 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb2S4R1M3 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
H2afb2S4R1M3 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb2S4R1M3 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
H2afb2S4R1M3 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb2S4R1M3 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.92□□□□□ -0.34
H2afb2S4R1M3 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb2S4R1M3 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb2S4R1M3 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb2S4R1M3 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
H2afb2S4R1M3 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb2S4R1M3 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.92□□□□□ -0.34
H2afb2S4R1M3 Gm11814-201ENSMUST00000119515 929 ntBASIC12.92□□□□□ -0.34
H2afb2S4R1M3 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.92□□□□□ -0.34
H2afb2S4R1M3 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb2S4R1M3 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb2S4R1M3 Gm8652-201ENSMUST00000181363 964 ntBASIC12.92□□□□□ -0.34
H2afb2S4R1M3 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.92□□□□□ -0.34
H2afb2S4R1M3 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.92□□□□□ -0.34
H2afb2S4R1M3 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.92□□□□□ -0.34
H2afb2S4R1M3 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb2S4R1M3 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.92□□□□□ -0.34
H2afb2S4R1M3 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.92□□□□□ -0.34
H2afb2S4R1M3 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb2S4R1M3 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb2S4R1M3 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb2S4R1M3 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb2S4R1M3 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb2S4R1M3 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb2S4R1M3 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb2S4R1M3 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb2S4R1M3 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb2S4R1M3 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
H2afb2S4R1M3 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.92□□□□□ -0.34
H2afb2S4R1M3 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb2S4R1M3 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb2S4R1M3 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
H2afb2S4R1M3 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb2S4R1M3 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb2S4R1M3 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
H2afb2S4R1M3 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.92□□□□□ -0.34
H2afb2S4R1M3 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb2S4R1M3 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.91□□□□□ -0.34
H2afb2S4R1M3 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb2S4R1M3 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.91□□□□□ -0.34
H2afb2S4R1M3 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb2S4R1M3 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb2S4R1M3 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb2S4R1M3 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
H2afb2S4R1M3 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.91□□□□□ -0.34
H2afb2S4R1M3 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
H2afb2S4R1M3 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb2S4R1M3 Gm12291-201ENSMUST00000121627 311 ntBASIC12.91□□□□□ -0.34
H2afb2S4R1M3 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.91□□□□□ -0.34
H2afb2S4R1M3 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.91□□□□□ -0.34
H2afb2S4R1M3 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb2S4R1M3 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.91□□□□□ -0.34
H2afb2S4R1M3 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.91□□□□□ -0.34
H2afb2S4R1M3 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
H2afb2S4R1M3 Gm27486-201ENSMUST00000184923 80 ntBASIC12.91□□□□□ -0.34
H2afb2S4R1M3 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
H2afb2S4R1M3 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb2S4R1M3 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb2S4R1M3 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb2S4R1M3 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb2S4R1M3 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb2S4R1M3 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb2S4R1M3 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb2S4R1M3 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb2S4R1M3 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb2S4R1M3 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb2S4R1M3 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb2S4R1M3 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
H2afb2S4R1M3 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
H2afb2S4R1M3 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb2S4R1M3 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb2S4R1M3 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.91□□□□□ -0.34
H2afb2S4R1M3 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb2S4R1M3 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.91□□□□□ -0.34
H2afb2S4R1M3 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb2S4R1M3 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb2S4R1M3 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb2S4R1M3 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
H2afb2S4R1M3 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb2S4R1M3 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb2S4R1M3 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb2S4R1M3 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb2S4R1M3 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb2S4R1M3 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb2S4R1M3 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb2S4R1M3 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.9□□□□□ -0.34
H2afb2S4R1M3 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
H2afb2S4R1M3 Gm12203-201ENSMUST00000118235 598 ntBASIC12.9□□□□□ -0.34
H2afb2S4R1M3 Gm13369-201ENSMUST00000119442 987 ntBASIC12.9□□□□□ -0.34
H2afb2S4R1M3 Gm12209-201ENSMUST00000120089 596 ntBASIC12.9□□□□□ -0.34
H2afb2S4R1M3 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms