Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Gm27847-201ENSMUST00000183711 107 ntBASIC12.86□□□□□ -0.35
Tubb3Q9ERD7 Gm27375-201ENSMUST00000183799 107 ntBASIC12.86□□□□□ -0.35
Tubb3Q9ERD7 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.86□□□□□ -0.35
Tubb3Q9ERD7 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb3Q9ERD7 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Tubb3Q9ERD7 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.86□□□□□ -0.35
Tubb3Q9ERD7 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb3Q9ERD7 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb3Q9ERD7 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb3Q9ERD7 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.86□□□□□ -0.35
Tubb3Q9ERD7 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb3Q9ERD7 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.86□□□□□ -0.35
Tubb3Q9ERD7 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Tubb3Q9ERD7 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb3Q9ERD7 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb3Q9ERD7 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb3Q9ERD7 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb3Q9ERD7 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb3Q9ERD7 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb3Q9ERD7 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb3Q9ERD7 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb3Q9ERD7 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tubb3Q9ERD7 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Gm13612-201ENSMUST00000119276 390 ntBASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Mir1982-201ENSMUST00000157368 74 ntBASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 AY702102-202ENSMUST00000194651 1173 ntBASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Tubb3Q9ERD7 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Tubb3Q9ERD7 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms