Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgn3Q9DCB1 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 Gm16476-201ENSMUST00000221544 139 ntBASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Hmgn3Q9DCB1 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn3Q9DCB1 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn3Q9DCB1 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn3Q9DCB1 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn3Q9DCB1 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn3Q9DCB1 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn3Q9DCB1 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn3Q9DCB1 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn3Q9DCB1 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn3Q9DCB1 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn3Q9DCB1 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn3Q9DCB1 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn3Q9DCB1 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn3Q9DCB1 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn3Q9DCB1 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Hmgn3Q9DCB1 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Hmgn3Q9DCB1 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn3Q9DCB1 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.11□□□□□ -0.47
Hmgn3Q9DCB1 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn3Q9DCB1 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn3Q9DCB1 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.11□□□□□ -0.47
Hmgn3Q9DCB1 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn3Q9DCB1 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.11□□□□□ -0.47
Hmgn3Q9DCB1 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn3Q9DCB1 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Hmgn3Q9DCB1 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn3Q9DCB1 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn3Q9DCB1 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn3Q9DCB1 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn3Q9DCB1 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn3Q9DCB1 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn3Q9DCB1 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn3Q9DCB1 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Hmgn3Q9DCB1 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn3Q9DCB1 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn3Q9DCB1 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn3Q9DCB1 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn3Q9DCB1 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Hmgn3Q9DCB1 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn3Q9DCB1 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn3Q9DCB1 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn3Q9DCB1 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hmgn3Q9DCB1 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.11□□□□□ -0.47
Hmgn3Q9DCB1 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms