Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Gm18049-201ENSMUST00000208909 581 ntBASIC13.07□□□□□ -0.32
Sf3a3Q9D554 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Sf3a3Q9D554 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3a3Q9D554 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3a3Q9D554 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3a3Q9D554 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3a3Q9D554 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.07□□□□□ -0.32
Sf3a3Q9D554 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3a3Q9D554 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3a3Q9D554 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3a3Q9D554 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3a3Q9D554 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3a3Q9D554 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sf3a3Q9D554 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3a3Q9D554 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3a3Q9D554 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3a3Q9D554 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3a3Q9D554 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Sf3a3Q9D554 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Sf3a3Q9D554 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.06□□□□□ -0.32
Sf3a3Q9D554 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3a3Q9D554 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3a3Q9D554 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.06□□□□□ -0.32
Sf3a3Q9D554 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3a3Q9D554 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3a3Q9D554 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3a3Q9D554 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3a3Q9D554 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3a3Q9D554 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3a3Q9D554 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3a3Q9D554 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3a3Q9D554 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3a3Q9D554 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Sf3a3Q9D554 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Sf3a3Q9D554 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Sf3a3Q9D554 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3a3Q9D554 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.06□□□□□ -0.32
Sf3a3Q9D554 Gm9719-201ENSMUST00000162765 543 ntBASIC13.06□□□□□ -0.32
Sf3a3Q9D554 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Sf3a3Q9D554 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.06□□□□□ -0.32
Sf3a3Q9D554 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3a3Q9D554 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Sf3a3Q9D554 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3a3Q9D554 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.06□□□□□ -0.32
Sf3a3Q9D554 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3a3Q9D554 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3a3Q9D554 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3a3Q9D554 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3a3Q9D554 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3a3Q9D554 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3a3Q9D554 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.06□□□□□ -0.32
Sf3a3Q9D554 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Sf3a3Q9D554 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Sf3a3Q9D554 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Sf3a3Q9D554 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3a3Q9D554 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.06□□□□□ -0.32
Sf3a3Q9D554 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Sf3a3Q9D554 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Daam2-202ENSMUST00000224595 1926 ntBASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Gm12428-201ENSMUST00000119844 727 ntBASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Mir1897-201ENSMUST00000122581 272 ntBASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Gm9727-201ENSMUST00000161387 555 ntBASIC13.05□□□□□ -0.32
Sf3a3Q9D554 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Gm10819-201ENSMUST00000099988 561 ntBASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Sf3a3Q9D554 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms