Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Gm10305-201ENSMUST00000195331 2475 ntBASIC10.8□□□□□ -0.68
Ssbp3Q9D032 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ssbp3Q9D032 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ssbp3Q9D032 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ssbp3Q9D032 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ssbp3Q9D032 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ssbp3Q9D032 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ssbp3Q9D032 Gm5620-201ENSMUST00000077991 1348 ntBASIC10.8□□□□□ -0.68
Ssbp3Q9D032 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ssbp3Q9D032 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Ssbp3Q9D032 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ssbp3Q9D032 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Ssbp3Q9D032 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ssbp3Q9D032 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ssbp3Q9D032 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ssbp3Q9D032 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ssbp3Q9D032 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ssbp3Q9D032 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ssbp3Q9D032 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
Ssbp3Q9D032 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ssbp3Q9D032 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ssbp3Q9D032 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ssbp3Q9D032 Gm14608-201ENSMUST00000120030 1553 ntBASIC10.79□□□□□ -0.68
Ssbp3Q9D032 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ssbp3Q9D032 Mir686-201ENSMUST00000102174 109 ntBASIC10.79□□□□□ -0.68
Ssbp3Q9D032 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Ssbp3Q9D032 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC10.79□□□□□ -0.68
Ssbp3Q9D032 Gm13392-201ENSMUST00000117708 150 ntBASIC10.79□□□□□ -0.68
Ssbp3Q9D032 Gm11637-201ENSMUST00000120601 592 ntBASIC10.79□□□□□ -0.68
Ssbp3Q9D032 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ssbp3Q9D032 Gm16479-201ENSMUST00000121706 932 ntBASIC10.79□□□□□ -0.68
Ssbp3Q9D032 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ssbp3Q9D032 Gm27572-201ENSMUST00000183702 255 ntBASIC10.79□□□□□ -0.68
Ssbp3Q9D032 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ssbp3Q9D032 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC10.79□□□□□ -0.68
Ssbp3Q9D032 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC10.79□□□□□ -0.68
Ssbp3Q9D032 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ssbp3Q9D032 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ssbp3Q9D032 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ssbp3Q9D032 n-R5s77-201ENSMUST00000083757 119 ntBASIC10.79□□□□□ -0.68
Ssbp3Q9D032 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ssbp3Q9D032 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ssbp3Q9D032 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ssbp3Q9D032 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ssbp3Q9D032 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ssbp3Q9D032 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Ssbp3Q9D032 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ssbp3Q9D032 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC10.79□□□□□ -0.68
Ssbp3Q9D032 Gm37795-201ENSMUST00000194216 2459 ntBASIC10.79□□□□□ -0.68
Ssbp3Q9D032 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ssbp3Q9D032 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ssbp3Q9D032 Gm9924-202ENSMUST00000192760 2311 ntBASIC10.79□□□□□ -0.68
Ssbp3Q9D032 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ssbp3Q9D032 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ssbp3Q9D032 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Ssbp3Q9D032 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Ssbp3Q9D032 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Ssbp3Q9D032 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC10.78□□□□□ -0.68
Ssbp3Q9D032 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ssbp3Q9D032 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ssbp3Q9D032 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ssbp3Q9D032 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ssbp3Q9D032 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ssbp3Q9D032 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ssbp3Q9D032 AC154725.1-201ENSMUST00000224826 1961 ntBASIC10.78□□□□□ -0.68
Ssbp3Q9D032 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC10.78□□□□□ -0.68
Ssbp3Q9D032 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ssbp3Q9D032 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ssbp3Q9D032 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ssbp3Q9D032 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Ssbp3Q9D032 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC10.78□□□□□ -0.68
Ssbp3Q9D032 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC10.78□□□□□ -0.68
Ssbp3Q9D032 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ssbp3Q9D032 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC10.78□□□□□ -0.68
Ssbp3Q9D032 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ssbp3Q9D032 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ssbp3Q9D032 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ssbp3Q9D032 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC10.78□□□□□ -0.68
Ssbp3Q9D032 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ssbp3Q9D032 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Ssbp3Q9D032 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ssbp3Q9D032 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ssbp3Q9D032 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ssbp3Q9D032 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ssbp3Q9D032 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ssbp3Q9D032 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ssbp3Q9D032 Gm43423-201ENSMUST00000198390 2094 ntBASIC10.78□□□□□ -0.68
Ssbp3Q9D032 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ssbp3Q9D032 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ssbp3Q9D032 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ssbp3Q9D032 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ssbp3Q9D032 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ssbp3Q9D032 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Ssbp3Q9D032 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Ssbp3Q9D032 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Ssbp3Q9D032 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Ssbp3Q9D032 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Ssbp3Q9D032 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC10.77□□□□□ -0.68
Ssbp3Q9D032 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Ssbp3Q9D032 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms