Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
Shmt2Q9CZN7 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt2Q9CZN7 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt2Q9CZN7 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt2Q9CZN7 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt2Q9CZN7 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Shmt2Q9CZN7 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt2Q9CZN7 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Shmt2Q9CZN7 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt2Q9CZN7 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt2Q9CZN7 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.36□□□□□ -0.43
Shmt2Q9CZN7 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 Mir874-201ENSMUST00000104769 76 ntBASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 Gm29608-201ENSMUST00000190444 463 ntBASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 Gm8463-201ENSMUST00000208573 613 ntBASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.35□□□□□ -0.43
Shmt2Q9CZN7 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Gm5745-201ENSMUST00000183748 313 ntBASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Gm18473-201ENSMUST00000220543 868 ntBASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Gm26315-201ENSMUST00000083890 321 ntBASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.34□□□□□ -0.43
Shmt2Q9CZN7 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms