Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm26616-202ENSMUST00000195676 3107 ntBASIC14.73□□□□□ -0.05
Trim11Q99PQ2 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim11Q99PQ2 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim11Q99PQ2 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim11Q99PQ2 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.73□□□□□ -0.05
Trim11Q99PQ2 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim11Q99PQ2 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim11Q99PQ2 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim11Q99PQ2 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim11Q99PQ2 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim11Q99PQ2 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim11Q99PQ2 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim11Q99PQ2 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim11Q99PQ2 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim11Q99PQ2 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim11Q99PQ2 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim11Q99PQ2 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.72□□□□□ -0.05
Trim11Q99PQ2 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Trim11Q99PQ2 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.72□□□□□ -0.05
Trim11Q99PQ2 Gm23984-201ENSMUST00000157139 203 ntBASIC14.72□□□□□ -0.05
Trim11Q99PQ2 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
Trim11Q99PQ2 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim11Q99PQ2 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.72□□□□□ -0.05
Trim11Q99PQ2 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim11Q99PQ2 Gm7287-201ENSMUST00000205267 602 ntBASIC14.72□□□□□ -0.05
Trim11Q99PQ2 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.72□□□□□ -0.05
Trim11Q99PQ2 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC14.72□□□□□ -0.05
Trim11Q99PQ2 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.72□□□□□ -0.05
Trim11Q99PQ2 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Trim11Q99PQ2 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim11Q99PQ2 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim11Q99PQ2 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trim11Q99PQ2 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim11Q99PQ2 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC14.72□□□□□ -0.05
Trim11Q99PQ2 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim11Q99PQ2 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trim11Q99PQ2 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim11Q99PQ2 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trim11Q99PQ2 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC14.72□□□□□ -0.05
Trim11Q99PQ2 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim11Q99PQ2 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim11Q99PQ2 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim11Q99PQ2 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim11Q99PQ2 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim11Q99PQ2 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim11Q99PQ2 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim11Q99PQ2 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim11Q99PQ2 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim11Q99PQ2 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim11Q99PQ2 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim11Q99PQ2 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim11Q99PQ2 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trim11Q99PQ2 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.71□□□□□ -0.05
Trim11Q99PQ2 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim11Q99PQ2 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.71□□□□□ -0.05
Trim11Q99PQ2 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trim11Q99PQ2 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim11Q99PQ2 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trim11Q99PQ2 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim11Q99PQ2 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trim11Q99PQ2 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trim11Q99PQ2 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim11Q99PQ2 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trim11Q99PQ2 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim11Q99PQ2 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim11Q99PQ2 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim11Q99PQ2 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.06
Trim11Q99PQ2 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim11Q99PQ2 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim11Q99PQ2 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim11Q99PQ2 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Trim11Q99PQ2 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim11Q99PQ2 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.71□□□□□ -0.06
Trim11Q99PQ2 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim11Q99PQ2 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trim11Q99PQ2 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Trim11Q99PQ2 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Trim11Q99PQ2 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim11Q99PQ2 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim11Q99PQ2 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim11Q99PQ2 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim11Q99PQ2 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trim11Q99PQ2 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC14.7□□□□□ -0.06
Trim11Q99PQ2 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim11Q99PQ2 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim11Q99PQ2 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim11Q99PQ2 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim11Q99PQ2 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trim11Q99PQ2 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim11Q99PQ2 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim11Q99PQ2 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim11Q99PQ2 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trim11Q99PQ2 Gm14928-201ENSMUST00000120198 477 ntBASIC14.7□□□□□ -0.06
Trim11Q99PQ2 Gm11918-201ENSMUST00000121660 179 ntBASIC14.7□□□□□ -0.06
Trim11Q99PQ2 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim11Q99PQ2 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC14.7□□□□□ -0.06
Trim11Q99PQ2 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim11Q99PQ2 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trim11Q99PQ2 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.7□□□□□ -0.06
Trim11Q99PQ2 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms