Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim8Q99PJ2 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim8Q99PJ2 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12.7□□□□□ -0.38
Trim8Q99PJ2 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim8Q99PJ2 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim8Q99PJ2 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim8Q99PJ2 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim8Q99PJ2 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim8Q99PJ2 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim8Q99PJ2 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.69□□□□□ -0.38
Trim8Q99PJ2 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim8Q99PJ2 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim8Q99PJ2 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trim8Q99PJ2 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim8Q99PJ2 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim8Q99PJ2 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Trim8Q99PJ2 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim8Q99PJ2 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim8Q99PJ2 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.69□□□□□ -0.38
Trim8Q99PJ2 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim8Q99PJ2 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trim8Q99PJ2 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim8Q99PJ2 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim8Q99PJ2 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim8Q99PJ2 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim8Q99PJ2 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim8Q99PJ2 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim8Q99PJ2 Gm15487-201ENSMUST00000122373 465 ntBASIC12.69□□□□□ -0.38
Trim8Q99PJ2 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Trim8Q99PJ2 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Trim8Q99PJ2 Gm21854-201ENSMUST00000179901 471 ntBASIC12.69□□□□□ -0.38
Trim8Q99PJ2 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim8Q99PJ2 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.69□□□□□ -0.38
Trim8Q99PJ2 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.69□□□□□ -0.38
Trim8Q99PJ2 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim8Q99PJ2 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim8Q99PJ2 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim8Q99PJ2 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim8Q99PJ2 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim8Q99PJ2 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim8Q99PJ2 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim8Q99PJ2 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim8Q99PJ2 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim8Q99PJ2 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim8Q99PJ2 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.69□□□□□ -0.38
Trim8Q99PJ2 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trim8Q99PJ2 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trim8Q99PJ2 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim8Q99PJ2 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim8Q99PJ2 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim8Q99PJ2 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim8Q99PJ2 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim8Q99PJ2 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.68□□□□□ -0.38
Trim8Q99PJ2 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim8Q99PJ2 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trim8Q99PJ2 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim8Q99PJ2 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim8Q99PJ2 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim8Q99PJ2 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim8Q99PJ2 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trim8Q99PJ2 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim8Q99PJ2 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim8Q99PJ2 Gm29667-201ENSMUST00000190817 490 ntBASIC12.68□□□□□ -0.38
Trim8Q99PJ2 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim8Q99PJ2 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim8Q99PJ2 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim8Q99PJ2 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim8Q99PJ2 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.68□□□□□ -0.38
Trim8Q99PJ2 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim8Q99PJ2 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.68□□□□□ -0.38
Trim8Q99PJ2 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim8Q99PJ2 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Trim8Q99PJ2 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim8Q99PJ2 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.68□□□□□ -0.38
Trim8Q99PJ2 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim8Q99PJ2 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim8Q99PJ2 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Gm6447-201ENSMUST00000118905 835 ntBASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Mir7684-201ENSMUST00000183858 60 ntBASIC12.67□□□□□ -0.38
Trim8Q99PJ2 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Gm19078-201ENSMUST00000206311 727 ntBASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim8Q99PJ2 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms