Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Pcdh15Q99PJ1 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh15Q99PJ1 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh15Q99PJ1 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.24□□□□□ -0.13
Pcdh15Q99PJ1 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh15Q99PJ1 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh15Q99PJ1 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh15Q99PJ1 Gm12419-201ENSMUST00000116649 636 ntBASIC14.24□□□□□ -0.13
Pcdh15Q99PJ1 Gm11422-201ENSMUST00000118925 1103 ntBASIC14.24□□□□□ -0.13
Pcdh15Q99PJ1 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Pcdh15Q99PJ1 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh15Q99PJ1 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh15Q99PJ1 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Pcdh15Q99PJ1 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh15Q99PJ1 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh15Q99PJ1 Gm9111-201ENSMUST00000219394 709 ntBASIC14.24□□□□□ -0.13
Pcdh15Q99PJ1 Gm19009-201ENSMUST00000223072 823 ntBASIC14.24□□□□□ -0.13
Pcdh15Q99PJ1 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh15Q99PJ1 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Pcdh15Q99PJ1 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh15Q99PJ1 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh15Q99PJ1 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh15Q99PJ1 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh15Q99PJ1 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh15Q99PJ1 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pcdh15Q99PJ1 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC14.24□□□□□ -0.13
Pcdh15Q99PJ1 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 Gm11354-201ENSMUST00000121974 422 ntBASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 Gm18367-201ENSMUST00000176139 600 ntBASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 Gm12407-201ENSMUST00000180219 324 ntBASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 Gm44401-201ENSMUST00000204462 2375 ntBASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 Gm12856-201ENSMUST00000119471 1293 ntBASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 Gm12969-201ENSMUST00000120199 1004 ntBASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 Gm11980-201ENSMUST00000121445 986 ntBASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdh15Q99PJ1 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh15Q99PJ1 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Pcdh15Q99PJ1 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh15Q99PJ1 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC14.22□□□□□ -0.13
Pcdh15Q99PJ1 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh15Q99PJ1 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh15Q99PJ1 Retreg1-206ENSMUST00000228306 1430 ntBASIC14.22□□□□□ -0.13
Pcdh15Q99PJ1 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh15Q99PJ1 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh15Q99PJ1 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh15Q99PJ1 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh15Q99PJ1 Gm15566-201ENSMUST00000121130 590 ntBASIC14.22□□□□□ -0.13
Pcdh15Q99PJ1 Gm12164-201ENSMUST00000121695 551 ntBASIC14.22□□□□□ -0.13
Pcdh15Q99PJ1 Gm13182-201ENSMUST00000122241 312 ntBASIC14.22□□□□□ -0.13
Pcdh15Q99PJ1 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh15Q99PJ1 Gm17798-201ENSMUST00000182282 1035 ntBASIC14.22□□□□□ -0.13
Pcdh15Q99PJ1 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC14.22□□□□□ -0.13
Pcdh15Q99PJ1 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pcdh15Q99PJ1 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC14.22□□□□□ -0.13
Pcdh15Q99PJ1 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh15Q99PJ1 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Pcdh15Q99PJ1 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh15Q99PJ1 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh15Q99PJ1 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh15Q99PJ1 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pcdh15Q99PJ1 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh15Q99PJ1 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh15Q99PJ1 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh15Q99PJ1 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdh15Q99PJ1 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms