Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.39□□□□□ -0.27
Cdk5rap3Q99LM2 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cdk5rap3Q99LM2 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk5rap3Q99LM2 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk5rap3Q99LM2 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk5rap3Q99LM2 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.39□□□□□ -0.27
Cdk5rap3Q99LM2 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk5rap3Q99LM2 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk5rap3Q99LM2 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk5rap3Q99LM2 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk5rap3Q99LM2 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk5rap3Q99LM2 Gm14350-201ENSMUST00000116642 640 ntBASIC13.39□□□□□ -0.27
Cdk5rap3Q99LM2 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk5rap3Q99LM2 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Cdk5rap3Q99LM2 Gm28631-201ENSMUST00000190740 334 ntBASIC13.39□□□□□ -0.27
Cdk5rap3Q99LM2 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.39□□□□□ -0.27
Cdk5rap3Q99LM2 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.39□□□□□ -0.27
Cdk5rap3Q99LM2 Itm2b-204ENSMUST00000228637 783 ntBASIC13.39□□□□□ -0.27
Cdk5rap3Q99LM2 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Cdk5rap3Q99LM2 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk5rap3Q99LM2 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Cdk5rap3Q99LM2 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk5rap3Q99LM2 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk5rap3Q99LM2 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk5rap3Q99LM2 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk5rap3Q99LM2 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cdk5rap3Q99LM2 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Cdk5rap3Q99LM2 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.39□□□□□ -0.27
Cdk5rap3Q99LM2 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk5rap3Q99LM2 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.39□□□□□ -0.27
Cdk5rap3Q99LM2 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk5rap3Q99LM2 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk5rap3Q99LM2 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.39□□□□□ -0.27
Cdk5rap3Q99LM2 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk5rap3Q99LM2 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk5rap3Q99LM2 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cdk5rap3Q99LM2 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap3Q99LM2 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap3Q99LM2 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Cdk5rap3Q99LM2 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap3Q99LM2 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap3Q99LM2 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cdk5rap3Q99LM2 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
Cdk5rap3Q99LM2 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap3Q99LM2 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap3Q99LM2 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap3Q99LM2 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap3Q99LM2 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap3Q99LM2 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap3Q99LM2 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap3Q99LM2 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap3Q99LM2 Mir686-201ENSMUST00000102174 109 ntBASIC13.38□□□□□ -0.27
Cdk5rap3Q99LM2 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap3Q99LM2 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.38□□□□□ -0.27
Cdk5rap3Q99LM2 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.38□□□□□ -0.27
Cdk5rap3Q99LM2 Gm5687-201ENSMUST00000118252 640 ntBASIC13.38□□□□□ -0.27
Cdk5rap3Q99LM2 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Cdk5rap3Q99LM2 Gm14057-201ENSMUST00000120631 482 ntBASIC13.38□□□□□ -0.27
Cdk5rap3Q99LM2 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap3Q99LM2 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.38□□□□□ -0.27
Cdk5rap3Q99LM2 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.38□□□□□ -0.27
Cdk5rap3Q99LM2 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.38□□□□□ -0.27
Cdk5rap3Q99LM2 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Cdk5rap3Q99LM2 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap3Q99LM2 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.38□□□□□ -0.27
Cdk5rap3Q99LM2 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.38□□□□□ -0.27
Cdk5rap3Q99LM2 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap3Q99LM2 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.38□□□□□ -0.27
Cdk5rap3Q99LM2 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap3Q99LM2 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap3Q99LM2 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC13.38□□□□□ -0.27
Cdk5rap3Q99LM2 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap3Q99LM2 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap3Q99LM2 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap3Q99LM2 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
Cdk5rap3Q99LM2 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Cdk5rap3Q99LM2 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap3Q99LM2 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cdk5rap3Q99LM2 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap3Q99LM2 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.37□□□□□ -0.27
Cdk5rap3Q99LM2 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.37□□□□□ -0.27
Cdk5rap3Q99LM2 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap3Q99LM2 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap3Q99LM2 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap3Q99LM2 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap3Q99LM2 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.37□□□□□ -0.27
Cdk5rap3Q99LM2 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap3Q99LM2 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap3Q99LM2 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap3Q99LM2 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap3Q99LM2 Gm16202-201ENSMUST00000117532 544 ntBASIC13.37□□□□□ -0.27
Cdk5rap3Q99LM2 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.37□□□□□ -0.27
Cdk5rap3Q99LM2 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cdk5rap3Q99LM2 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap3Q99LM2 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.37□□□□□ -0.27
Cdk5rap3Q99LM2 Gm44855-201ENSMUST00000205725 362 ntBASIC13.37□□□□□ -0.27
Cdk5rap3Q99LM2 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.37□□□□□ -0.27
Cdk5rap3Q99LM2 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap3Q99LM2 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cdk5rap3Q99LM2 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms